myRT

myRT report for GCA_004104015.1_ASM410401v1

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Seq: RYFV01000068.1 (1171 bp)
Overview 1 RT 1: 3-531 bp Neighborhood of RT #1 [3, 539] RVT-GII Feature: gene Location: 3-539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RYFV01000059.1 (1852 bp)
Overview 1 RT 1: 3-1796 bp Neighborhood of RT #1 [3, 1849] RVT-GII GIIM DDE_Tnp_ISL3 Feature: gene Location: 3-932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-492 bp Feature: domain Description: GIIM Note: maturase Location: 564-795 bp Feature: domain Description: GIIM Note: maturase Location: 564-795 bp Feature: gene Location: 1085-1849 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1112-1796 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1112 -1796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_ISL3 (pfam01610)

Seq: RYFV01000007.1 (107057 bp)
Overview 1 RT 1: 2437-6885 bp Neighborhood of RT #1 [2437, 7196] IS285 IS285 RVT-GII GIIM DDE_Tnp_1 DDE_Tnp_ISL3 Feature: gene Location: 2437-2901 bp Feature: domain Description: IS285 Location: 2443-2758 bp Feature: domain Description: IS285 Location: 2443 -2758 bp Feature: gene Location: 3102-3275 bp Feature: domain Description: IS285 Location: 3108-3264 bp Feature: domain Description: IS285 Location: 3 108-3 264 bp Feature: gene Location: 3950-5401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4292-4973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4292-4973 bp Feature: domain Description: GIIM Note: maturase Location: 5048-5264 bp Feature: domain Description: GIIM Note: maturase Location: 5048-5264 bp Feature: gene Location: 6175-6648 bp Feature: domain Description: DDE_Tnp_1 Location: 6253-6472 bp Feature: domain Description: DDE_Tnp_1 Location: 6253 -6472 bp Feature: gene Location: 6675-7196 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 6681-6885 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 6681-6885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), DDE_Tnp_ISL3 (pfam01610)

Seq: RYFV01000050.1 (4080 bp)
Overview 1 RT 1: 1-3692 bp Neighborhood of RT #1 [1, 3730] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Feature: gene Location: 1-1263 bp Feature: gene Location: 1398-1607 bp Feature: domain Description: Cas2_I_II_III Location: 1404-1566 bp Feature: domain Description: Cas2_I_II_III Location: 14 04 -1566 bp Feature: gene Location: 1676-3730 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2054-2654 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2054 -2654 bp Feature: domain Description: Cas1_I-II-III Location: 2732-3692 bp Feature: domain Description: Cas1_I-II-III Location: 2732-3692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656)