myRT

myRT report for GCA_004104355.1_ASM410435v1

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Seq: RJLM01000070.1 (1130 bp)
Overview 1 RT 1: 20-491 bp Neighborhood of RT #1 [20, 1129] RVT-CRISPR-like Feature: gene Location: 20-1129 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 41-491 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 41 -491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: RJLM01000005.1 (451768 bp)
Overview 1 RT 1: 159261-164508 bp Neighborhood of RT #1 [159261, 164508] SLATT_6 RVT-UG7 SMODS AGS_C Feature: gene Location: 159261-159389 bp Feature: gene Location: 160218-160832 bp Feature: domain Description: SLATT_6 Location: 160221-160743 bp Feature: domain Description: SLATT_6 Location: 1602 2 1-160743 bp Feature: gene Location: 160903-162432 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 161284-161704 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1612 84-161704 bp Feature: gene Location: 162801-164069 bp Feature: domain Description: SMODS Location: 162804-163281 bp Feature: domain Description: SMODS Location: 162 804-1632 81 bp Feature: domain Description: AGS_C Location: 163692-164064 bp Feature: domain Description: AGS_C Location: 163692 -164064 bp Feature: gene Location: 164242-164508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_6 (pfam18169), RVT-UG7, SMODS (pfam18144), AGS_C (pfam18134)

Seq: RJLM01000259.1 (379 bp)
Overview 1 RT 1: 2-376 bp Neighborhood of RT #1 [2, 376] RVT-G2L Feature: gene Location: 2-160 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 5-59 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 5-59 bp Feature: gene Location: 176-376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L

Seq: RJLM01000024.1 (30876 bp)
Overview 1 RT 1: 11903-16191 bp Neighborhood of RT #1 [11903, 16811] RVT_N RVT-GII GIIM HEPN_Toprim_N Feature: gene Location: 11903-12151 bp Feature: gene Location: 12355-12666 bp Feature: gene Location: 12698-14170 bp Feature: domain Description: RVT_N Location: 12746-12989 bp Feature: domain Description: RVT_N Location: 1274 6-12989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13034-13661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13034 -13661 bp Feature: domain Description: GIIM Note: maturase Location: 13718-13946 bp Feature: domain Description: GIIM Note: maturase Location: 13718-1394 6 bp Feature: gene Location: 14522-15433 bp Feature: gene Location: 15519-16811 bp Feature: domain Description: HEPN_Toprim_N Location: 15522-16191 bp Feature: domain Description: HEPN_Toprim_N Location: 15522-16191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HEPN_Toprim_N (pfam18871)

Seq: RJLM01000030.1 (5981 bp)
Overview 1 RT 1: 881-3155 bp Neighborhood of RT #1 [881, 3388] RVT_N RVT-GII RVT-GII GIIM DUF2220 Feature: gene Location: 881-1063 bp Feature: gene Location: 1099-1464 bp Feature: domain Description: RVT_N Location: 1306-1459 bp Feature: domain Description: RVT_N Location: 1306-145 9 bp Feature: gene Location: 1511-1825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1577-1760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 77-1760 bp Feature: gene Location: 1762-2553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1765-2062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1765 -2062 bp Feature: domain Description: GIIM Note: maturase Location: 2122-2347 bp Feature: domain Description: GIIM Note: maturase Location: 2122-2347 bp Feature: gene Location: 2695-2895 bp Feature: gene Location: 3086-3388 bp Feature: domain Description: DUF2220 Location: 3089-3155 bp Feature: domain Description: DUF2220 Location: 3089-315 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF2220 (pfam09983)

Seq: RJLM01000018.1 (74765 bp)
Overview 1 RT 1: 62385-67190 bp Neighborhood of RT #1 [62385, 67222] HTH_Tnp_ISL3 RVT_N RVT-GII GIIM PepSY_TM_like_2 DUF2271 Feature: gene Location: 62385-62681 bp Feature: gene Location: 62754-63257 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 63018-63162 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 6 3018-6 316 2 bp Feature: gene Location: 63990-65462 bp Feature: domain Description: RVT_N Location: 64038-64281 bp Feature: domain Description: RVT_N Location: 6 4038-6 4281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64326-64953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 4326 -6 4953 bp Feature: domain Description: GIIM Note: maturase Location: 65010-65238 bp Feature: domain Description: GIIM Note: maturase Location: 6 5010-6 5238 bp Feature: gene Location: 66034-66663 bp Feature: domain Description: PepSY_TM_like_2 Location: 66067-66661 bp Feature: domain Description: PepSY_TM_like_2 Location: 6 6 06 7-6 6 6 6 1 bp Feature: gene Location: 66698-67222 bp Feature: domain Description: DUF2271 Location: 66794-67190 bp Feature: domain Description: DUF2271 Location: 6 6 794-6 7190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_ISL3 (pfam13542), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PepSY_TM_like_2 (pfam16357), DUF2271 (pfam10029)