myRT

myRT report for GCA_004114465.1_ASM411446v1

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Seq: RDRA01000050.1 (14839 bp)
Overview 1 RT 1: 1-5184 bp Neighborhood of RT #1 [1, 5249] DUF3800 RVT-UG7 DUF2232 Feature: gene Location: 1-327 bp Feature: gene Location: 410-1111 bp Feature: domain Description: DUF3800 Location: 431-1007 bp Feature: domain Description: DUF3800 Location: 431 -1 007 bp Feature: gene Location: 1121-2731 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1565-1934 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 565-1 934 bp Feature: gene Location: 2827-3870 bp Feature: gene Location: 4269-5249 bp Feature: domain Description: DUF2232 Location: 4314-5184 bp Feature: domain Description: DUF2232 Location: 431 4-51 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3800 (pfam12686), RVT-UG7, DUF2232 (pfam09991)

Seq: RDRA01000041.1 (25081 bp)
Overview 1 RT 1: 17039-20561 bp Neighborhood of RT #1 [17039, 20566] group_II_RT_mat RVT-GII RVT-GII HTH_XRE COG3800 Feature: gene Location: 17039-17185 bp Feature: gene Location: 17505-18122 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 17853-18045 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 17853-18045 bp Feature: gene Location: 18142-18396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18151-18391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18151-18391 bp Feature: gene Location: 18493-18684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18514-18646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18514-18646 bp Feature: gene Location: 18794-18979 bp Feature: gene Location: 19160-20566 bp Feature: domain Description: HTH_XRE Location: 19187-19352 bp Feature: domain Description: HTH_XRE Location: 19187-19352 bp Feature: domain Description: COG3800 Location: 19577-20561 bp Feature: domain Description: COG3800 Location: 19577-2 0561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, HTH_XRE (smart00530), COG3800 (Predicted transcriptional regulator )

Seq: RDRA01000044.1 (20753 bp)
Overview 1 RT 1: 7457-12388 bp Neighborhood of RT #1 [7457, 12388] DltB Lipase_GDSL_2 RVT-GII Feature: gene Location: 7457-8851 bp Feature: domain Description: DltB Location: 7478-8639 bp Feature: domain Description: DltB Location: 7478-863 9 bp Feature: gene Location: 8870-9829 bp Feature: domain Description: Lipase_GDSL_2 Location: 9164-9794 bp Feature: domain Description: Lipase_GDSL_2 Location: 9164-9794 bp Feature: gene Location: 10412-11359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10625-11228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10625-11228 bp Feature: gene Location: 11927-12181 bp Feature: gene Location: 12233-12388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DltB (COG1696), Lipase_GDSL_2 (pfam13472), RVT-GII