myRT

myRT report for GCA_004115805.1_ASM411580v1

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Seq: NXII01000006.1 (150587 bp)
Overview 1 RT 1: 130496-135491 bp Neighborhood of RT #1 [130496, 135541] OEP OEP RVT_N RVT-GII GIIM HTH_Hin_like TlpA_like_family Feature: gene Location: 130496-131692 bp Feature: domain Description: OEP Location: 130571-131105 bp Feature: domain Description: OEP Location: 1 30571 -1 31 1 05 bp Feature: domain Description: OEP Location: 131171-131654 bp Feature: domain Description: OEP Location: 1 31 1 71 -1 31 654 bp Feature: gene Location: 131752-132063 bp Feature: gene Location: 133076-134533 bp Feature: domain Description: RVT_N Location: 133118-133361 bp Feature: domain Description: RVT_N Location: 1 331 1 8-1 33361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133412-134063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3341 2-1 34063 bp Feature: domain Description: GIIM Note: maturase Location: 134117-134351 bp Feature: domain Description: GIIM Note: maturase Location: 1 341 1 7-1 34351 bp Feature: gene Location: 134678-134887 bp Feature: domain Description: HTH_Hin_like Location: 134753-134876 bp Feature: domain Description: HTH_Hin_like Location: 1 34753-1 34876 bp Feature: gene Location: 134933-135541 bp Feature: domain Description: TlpA_like_family Location: 135176-135491 bp Feature: domain Description: TlpA_like_family Location: 1 351 76-1 35491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OEP (pfam02321), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_Hin_like (cd00569), TlpA_like_family (cd02966)

Seq: NXII01000010.1 (108886 bp)
Overview 1 RT 1: 70825-77126 bp Neighborhood of RT #1 [70825, 77233] AbiEii RVT-CRISPR Cas1_I-II-III RVT-CRISPR Couple_hipA HipA_C HTH_XRE Feature: gene Location: 70825-71478 bp Feature: domain Description: AbiEii Location: 70996-71182 bp Feature: domain Description: AbiEii Location: 70996-71182 bp Feature: gene Location: 71690-72154 bp Feature: gene Location: 73351-74964 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 73378-73552 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 73378-73552 bp Feature: domain Description: Cas1_I-II-III Location: 74008-74923 bp Feature: domain Description: Cas1_I-II-III Location: 74008-7492 3 bp Feature: gene Location: 74966-75478 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 75167-75473 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 75167-75473 bp Feature: gene Location: 75667-76926 bp Feature: domain Description: Couple_hipA Location: 75685-76009 bp Feature: domain Description: Couple_hipA Location: 75685-76009 bp Feature: domain Description: HipA_C Location: 76153-76819 bp Feature: domain Description: HipA_C Location: 76153-76819 bp Feature: gene Location: 76931-77233 bp Feature: domain Description: HTH_XRE Location: 76988-77126 bp Feature: domain Description: HTH_XRE Location: 76988-7712 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), RVT-CRISPR, Cas1_I-II-III (cl00656), Couple_hipA (pfam13657), HipA_C (pfam07804), HTH_XRE (smart00530)