myRT

myRT report for GCA_004116265.1_ASM411626v1

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Seq: QOUX01000032.1 (267958 bp)
Overview 1 RT 1: 41792-49762 bp Neighborhood of RT #1 [41792, 50013] DUF5317 M14-like SLH SLH SLH RVT-GII group_II_RT_mat DDE_Tnp_1 Feature: gene Location: 41792-42376 bp Feature: domain Description: DUF5317 Location: 41867-42311 bp Feature: domain Description: DUF531 7 Location: 41 867-4231 1 bp Feature: gene Location: 42784-46707 bp Feature: domain Description: M14-like Location: 43519-44131 bp Feature: domain Description: M1 4-like Location: 4351 9-441 31 bp Feature: domain Description: SLH Location: 46159-46285 bp Feature: domain Description: SLH Location: 461 59-46285 bp Feature: domain Description: SLH Location: 46345-46471 bp Feature: domain Description: SLH Location: 46345-46471 bp Feature: domain Description: SLH Location: 46540-46672 bp Feature: domain Description: SLH Location: 46540-46672 bp Feature: gene Location: 47441-48220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47696-48206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47696-48206 bp Feature: gene Location: 48240-48764 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 48249-48642 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 48249-48642 bp Feature: gene Location: 49093-50013 bp Feature: domain Description: DDE_Tnp_1 Location: 49144-49762 bp Feature: domain Description: DDE_Tnp_1 Location: 491 44-49762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5317 (pfam17248), M14-like (cd06905), SLH (pfam00395), RVT-GII, group_II_RT_mat (TIGR04416), DDE_Tnp_1 (pfam01609)

Seq: QOUX01000046.1 (1075112 bp)
Overview 1 RT 1: 150702-156755 bp Neighborhood of RT #1 [150702, 156755] sortase_srtB FAS1 FAS1 RVT-GII GIIM selA Feature: gene Location: 150702-151481 bp Feature: domain Description: sortase_srtB Location: 150714-151449 bp Feature: domain Description: sortase_srtB Location: 150714-151449 bp Feature: gene Location: 151555-152601 bp Feature: domain Description: FAS1 Location: 151621-152050 bp Feature: domain Description: FAS1 Location: 15162 1-152 050 bp Feature: domain Description: FAS1 Location: 152062-152479 bp Feature: domain Description: FAS1 Location: 152 062 -152 479 bp Feature: gene Location: 152836-154161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153091-153781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153091-153781 bp Feature: domain Description: GIIM Note: maturase Location: 153847-154069 bp Feature: domain Description: GIIM Note: maturase Location: 153847-154069 bp Feature: gene Location: 154857-156290 bp Feature: domain Description: selA Location: 154899-156276 bp Feature: domain Description: selA Location: 154899-1562 76 bp Feature: gene Location: 156609-156755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sortase_srtB (TIGR03064), FAS1 (smart00554), RVT-GII, GIIM (pfam08388), selA (TIGR00474)

Seq: QOUX01000001.1 (757380 bp)
Overview 1 RT 1: 566133-570104 bp Neighborhood of RT #1 [566133, 570104] RVT-GII GIIM cxxc_20_cxxc Feature: gene Location: 566133-566522 bp Feature: gene Location: 566619-567110 bp Feature: gene Location: 567639-568967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567894-568587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567894-568587 bp Feature: domain Description: GIIM Note: maturase Location: 568665-568881 bp Feature: domain Description: GIIM Note: maturase Location: 568665-568881 bp Feature: gene Location: 569135-569527 bp Feature: domain Description: cxxc_20_cxxc Location: 569246-569513 bp Feature: domain Description: cxxc_20_cxxc Location: 569246-569513 bp Feature: gene Location: 569682-570104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), cxxc_20_cxxc (TIGR04104)

Seq: QOUX01000047.1 (669268 bp)
Overview 1 RT 1: 85814-94465 bp 2 RT 2: 206179-211506 bp Neighborhood of RT #1 [85814, 94467] TPR Peptidase_M50B RVT-GII GIIM PRK10060 peroxid_rel Neighborhood of RT #2 [206179, 211961] RVT-UG2 DUF3578 McrB Feature: gene Location: 85814-88528 bp Feature: domain Description: TPR Location: 86051-86315 bp Feature: domain Description: TPR Location: 86051-86315 bp Feature: gene Location: 88622-89272 bp Feature: domain Description: Peptidase_M50B Location: 88646-89249 bp Feature: domain Description: Peptidase_M50B Location: 8864 6-8924 9 bp Feature: gene Location: 90027-91352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90282-90972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90282-90972 bp Feature: domain Description: GIIM Note: maturase Location: 91038-91260 bp Feature: domain Description: GIIM Note: maturase Location: 91038-91260 bp Feature: gene Location: 91808-94066 bp Feature: domain Description: PRK10060 Location: 92771-94034 bp Feature: domain Description: PRK10060 Location: 92771-94 034 bp Feature: gene Location: 94231-94467 bp Feature: domain Description: peroxid_rel Location: 94237-94465 bp Feature: domain Description: peroxid_rel Location: 94 237-94 4 65 bp Feature: gene Location: 206179-206856 bp Feature: gene Location: 207012-207143 bp Feature: gene Location: 207272-208663 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 207548-208376 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 20754 8-208376 bp Feature: gene Location: 208757-209233 bp Feature: gene Location: 209391-211961 bp Feature: domain Description: DUF3578 Location: 210285-210795 bp Feature: domain Description: DUF3578 Location: 210285-210795 bp Feature: domain Description: McrB Location: 210939-211506 bp Feature: domain Description: McrB Location: 210939-211506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), Peptidase_M50B (pfam13398), RVT-GII, GIIM (pfam08388), PRK10060 (cyclic di-GMP phosphodiesterase), peroxid_rel (TIGR01926), RVT-UG2, DUF3578 (pfam12102), McrB (COG4054)