myRT

myRT report for GCA_004125835.1_ASM412583v1

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Seq: QZFS01000003.1 (289111 bp)
Overview 1 RT 1: 225792-234497 bp Neighborhood of RT #1 [225792, 234631] Radical_SAM RVT-GII HNHc TraC-F-type RVT_N RVT-GII GIIM TraC-F-type PrgI Feature: gene Location: 225792-226700 bp Feature: domain Description: Radical_SAM Location: 226110-226572 bp Feature: domain Description: Radical_SAM Location: 2261 1 0-226572 bp Feature: gene Location: 226751-227074 bp Feature: gene Location: 227167-229092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227485-228217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227485-22821 7 bp Feature: domain Description: HNHc Note: nucleases Location: 228832-228964 bp Feature: domain Description: HNHc Note: nucleases Location: 228832-228964 bp Feature: gene Location: 229146-229382 bp Feature: gene Location: 229415-229582 bp Feature: gene Location: 229839-230651 bp Feature: domain Description: TraC-F-type Location: 230091-230526 bp Feature: domain Description: TraC-F-type Location: 230091 -230526 bp Feature: gene Location: 230488-232191 bp Feature: domain Description: RVT_N Location: 230590-230833 bp Feature: domain Description: RVT_N Location: 230590-230833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230878-231538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230878-231 538 bp Feature: domain Description: GIIM Note: maturase Location: 231592-231826 bp Feature: domain Description: GIIM Note: maturase Location: 231 592-231 826 bp Feature: gene Location: 232699-234279 bp Feature: domain Description: TraC-F-type Location: 233134-234247 bp Feature: domain Description: TraC-F-type Location: 2331 34-234247 bp Feature: gene Location: 234209-234631 bp Feature: domain Description: PrgI Location: 234224-234497 bp Feature: domain Description: PrgI Location: 234224-234497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000106.1 (18279 bp)
Overview 1 RT 1: 1-3946 bp Neighborhood of RT #1 [1, 4155] RVT-GII GIIM AAA-ATPase_like PDDEXK_9 DUF3990 Feature: gene Location: 1-126 bp Feature: gene Location: 165-1493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 3-1038 bp Feature: domain Description: GIIM Note: maturase Location: 1098-1317 bp Feature: domain Description: GIIM Note: maturase Location: 1098-1317 bp Feature: gene Location: 1730-3445 bp Feature: domain Description: AAA-ATPase_like Location: 1766-2651 bp Feature: domain Description: AAA-ATPase_like Location: 1766-2 651 bp Feature: domain Description: PDDEXK_9 Location: 3134-3431 bp Feature: domain Description: PDDEXK_9 Location: 3134-3431 bp Feature: gene Location: 3448-4155 bp Feature: domain Description: DUF3990 Location: 3460-3946 bp Feature: domain Description: DUF3990 Location: 3460-3946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000367.1 (589 bp)
Overview 1 RT 1: 2-587 bp Neighborhood of RT #1 [2, 587] RVT-GII Feature: gene Location: 2-271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-269 bp Feature: gene Location: 306-587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000249.1 (1887 bp)
Overview 1 RT 1: 3-1590 bp Neighborhood of RT #1 [3, 1811] RVT-GII GIIM Feature: gene Location: 3-152 bp Feature: gene Location: 507-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1326 bp Feature: domain Description: GIIM Note: maturase Location: 1380-1590 bp Feature: domain Description: GIIM Note: maturase Location: 1380-1590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000134.1 (12155 bp)
Overview 1 RT 1: 9915-11986 bp Neighborhood of RT #1 [9915, 12066] Methyltransf_11 HxlR RVT-GII GIIM Feature: gene Location: 9915-10646 bp Feature: domain Description: Methyltransf_11 Location: 10053-10335 bp Feature: domain Description: Methyltransf_11 Location: 1005 3-10335 bp Feature: gene Location: 10845-11177 bp Feature: domain Description: HxlR Location: 10884-11172 bp Feature: domain Description: HxlR Location: 10884-11172 bp Feature: gene Location: 11431-12066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11437-11686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11437-11686 bp Feature: domain Description: GIIM Note: maturase Location: 11767-11986 bp Feature: domain Description: GIIM Note: maturase Location: 11767-11986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000339.1 (789 bp)
Overview 1 RT 1: 84-570 bp Neighborhood of RT #1 [84, 788] RVT-GII GIIM Feature: gene Location: 84-788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-285 bp Feature: domain Description: GIIM Note: maturase Location: 339-570 bp Feature: domain Description: GIIM Note: maturase Location: 339-570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000242.1 (2198 bp)
Overview 1 RT 1: 158-2196 bp Neighborhood of RT #1 [158, 2196] RVT-GII Feature: gene Location: 158-2032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476-1220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47 6-1220 bp Feature: gene Location: 2071-2196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000045.1 (70065 bp)
Overview 1 RT 1: 16788-20787 bp Neighborhood of RT #1 [16788, 20787] BsuBI_PstI_RE_N BsuBI_PstI_RE met_A_Alw26 met_A_Alw26 RVT-Retrons HTH_XRE Feature: gene Location: 16788-17705 bp Feature: domain Description: BsuBI_PstI_RE_N Location: 16791-17193 bp Feature: domain Description: BsuBI_PstI_RE_N Location: 16791-17193 bp Feature: domain Description: BsuBI_PstI_RE Location: 17232-17682 bp Feature: domain Description: BsuBI_PstI_RE Location: 17232-1768 2 bp Feature: gene Location: 17698-19185 bp Feature: domain Description: met_A_Alw26 Location: 17764-18178 bp Feature: domain Description: met_A_Alw26 Location: 17764-18 178 bp Feature: domain Description: met_A_Alw26 Location: 18211-19111 bp Feature: domain Description: met_A_Alw26 Location: 18 211-19111 bp Feature: gene Location: 19258-20220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19405-19939 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19405-19939 bp Feature: gene Location: 20207-20512 bp Feature: domain Description: HTH_XRE Location: 20216-20372 bp Feature: domain Description: HTH_XRE Location: 20216-20372 bp Feature: gene Location: 20560-20787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000141.1 (11323 bp)
Overview 1 RT 1: 30-2206 bp Neighborhood of RT #1 [30, 2206] RVT-GII SR_TndX_transposase Recombinase Zn_ribbon_recom Feature: gene Location: 30-404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234-363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234-363 bp Feature: gene Location: 620-1813 bp Feature: domain Description: SR_TndX_transposase Location: 704-1142 bp Feature: domain Description: SR_TndX_transposase Location: 704-1142 bp Feature: domain Description: Recombinase Location: 1244-1607 bp Feature: domain Description: Recombinase Location: 1244-1607 bp Feature: domain Description: Zn_ribbon_recom Location: 1649-1799 bp Feature: domain Description: Zn_ribbon_recom Location: 1649 -179 9 bp Feature: gene Location: 1940-2206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000174.1 (6219 bp)
Overview 1 RT 1: 145-2975 bp Neighborhood of RT #1 [145, 2995] RVT-GII HNHc YozG TnpV Feature: gene Location: 145-2019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472-1210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472-1210 bp Feature: domain Description: HNHc Note: nucleases Location: 1753-1906 bp Feature: domain Description: HNHc Note: nucleases Location: 1753-1906 bp Feature: gene Location: 2374-2646 bp Feature: domain Description: YozG Location: 2383-2584 bp Feature: domain Description: YozG Location: 2383-2584 bp Feature: gene Location: 2606-2995 bp Feature: domain Description: TnpV Location: 2651-2975 bp Feature: domain Description: TnpV Location: 2651-2975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QZFS01000120.1 (15189 bp)
Overview 1 RT 1: 11659-14453 bp Neighborhood of RT #1 [11659, 14983] TTRAP RVT-GII DUF4316 HTH_TipAL-Mta Feature: gene Location: 11659-11892 bp Feature: gene Location: 12573-12776 bp Feature: domain Description: TTRAP Location: 12585-12765 bp Feature: domain Description: TTRAP Location: 12585-12765 bp Feature: gene Location: 12780-13784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12993-13332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12993-13332 bp Feature: domain Description: DUF4316 Location: 13590-13695 bp Feature: domain Description: DUF4316 Location: 13590-13695 bp Feature: gene Location: 13837-14037 bp Feature: gene Location: 14144-14983 bp Feature: domain Description: HTH_TipAL-Mta Location: 14153-14453 bp Feature: domain Description: HTH_TipAL-Mta Location: 14153-14453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT