myRT

myRT report for GCA_004136805.1_ASM413680v1

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Seq: QFRV01000364.1 (935 bp)
Overview 1 RT 1: 192-651 bp Neighborhood of RT #1 [192, 743] RVT-CRISPR-like Feature: gene Location: 192-743 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 261-651 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 261 -651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: QFRV01000153.1 (4493 bp)
Overview 1 RT 1: 1660-4491 bp Neighborhood of RT #1 [1660, 4491] PTZ00368 RVT-UG26 RNase_HI_RT_Ty3 Integrase_H2C2 Feature: gene Location: 1660-1986 bp Feature: domain Description: PTZ00368 Location: 1786-1978 bp Feature: domain Description: PTZ00368 Location: 1786-1978 bp Feature: gene Location: 2464-2658 bp Feature: gene Location: 2758-3105 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 2893-3085 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 2 893-3085 bp Feature: gene Location: 3192-4004 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3375-3720 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3375-372 0 bp Feature: domain Description: Integrase_H2C2 Location: 3894-4002 bp Feature: domain Description: Integrase_H2 C2 Location: 3894-4002 bp Feature: gene Location: 4255-4491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTZ00368 (universal minicircle sequence binding protein (UMSBP); Provisional), RVT-UG26, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921)

Seq: QFRV01000147.1 (4848 bp)
Overview 1 RT 1: 70-4570 bp Neighborhood of RT #1 [70, 4570] Retrotrans_gag retropepsin_like RVT-UNC RT_RNaseH_2 Feature: gene Location: 70-3294 bp Feature: domain Description: Retrotrans_gag Location: 958-1243 bp Feature: domain Description: Retrotrans_gag Location: 958-1243 bp Feature: domain Description: retropepsin_like Location: 1669-1936 bp Feature: domain Description: retropepsin_like Location: 1669-193 6 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2701-2866 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2701-2866 bp Feature: domain Description: RT_RNaseH_2 Location: 3085-3277 bp Feature: domain Description: RT_RNaseH_2 Location: 3 085-3 277 bp Feature: gene Location: 3849-4049 bp Feature: gene Location: 4331-4570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Retrotrans_gag (pfam03732), retropepsin_like (cd00303), RVT-UG26/RVT-UG11/RVT-UG16/RVT-UG3(RVT-UNC), RT_RNaseH_2 (pfam17919)

Seq: QFRV01000257.1 (1550 bp)
Overview 1 RT 1: 210-357 bp Neighborhood of RT #1 [210, 1466] RVT-GII Feature: gene Location: 210-1466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219-357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219-357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QFRV01000188.1 (2625 bp)
Overview 1 RT 1: 3-2623 bp Neighborhood of RT #1 [3, 2623] RVT-CRISPR-like L1-EN Feature: gene Location: 3-902 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 477-897 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 477-897 bp Feature: gene Location: 881-2044 bp Feature: domain Description: L1-EN Location: 914-1664 bp Feature: domain Description: L1-EN Location: 914-1664 bp Feature: gene Location: 2051-2623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, L1-EN (cd09076)

Seq: QFRV01000315.1 (1099 bp)
Overview 1 RT 1: 2-875 bp Neighborhood of RT #1 [2, 1096] RVT-CRISPR-like Feature: gene Location: 2-1096 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 230-875 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 230-875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR