myRT

myRT report for GCA_004137585.1_ASM413758v1

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Seq: RBFR01000027.1 (50861 bp)
Overview 1 RT 1: 54-2665 bp Neighborhood of RT #1 [54, 2796] RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 54-1574 bp Feature: domain Description: RVT_N Location: 111-354 bp Feature: domain Description: RVT_N Location: 1 1 1 -354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1 023 bp Feature: domain Description: GIIM Note: maturase Location: 1074-1308 bp Feature: domain Description: GIIM Note: maturase Location: 1 074-1 308 bp Feature: gene Location: 1810-1962 bp Feature: gene Location: 2422-2796 bp Feature: domain Description: Tra_M Location: 2470-2665 bp Feature: domain Description: Tra_M Location: 2470-2665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261)

Seq: RBFR01000046.1 (23898 bp)
Overview 1 RT 1: 2-2876 bp Neighborhood of RT #1 [2, 2876] RVT-UG5 DUF5338 Feature: gene Location: 2-1606 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 512-1040 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 512 -1040 bp Feature: gene Location: 1911-2276 bp Feature: domain Description: DUF5338 Location: 1920-2127 bp Feature: domain Description: DUF5338 Location: 192 0-2 12 7 bp Feature: gene Location: 2604-2876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, DUF5338 (pfam17273)

Seq: RBFR01000013.1 (84475 bp)
Overview 1 RT 1: 79388-84460 bp Neighborhood of RT #1 [79388, 84474] WGR_MMR_like DUF772 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 79388-79855 bp Feature: domain Description: WGR_MMR_like Location: 79472-79661 bp Feature: domain Description: WGR_MMR_like Location: 79472-79661 bp Feature: gene Location: 80193-81653 bp Feature: domain Description: DUF772 Location: 80376-80568 bp Feature: domain Description: DUF772 Location: 803 76-80568 bp Feature: gene Location: 81672-82871 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81891-82587 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81891-82587 bp Feature: gene Location: 83203-83556 bp Feature: domain Description: Avd_like Location: 83230-83536 bp Feature: domain Description: Avd_like Location: 83 23 0-83 53 6 bp Feature: gene Location: 83635-84474 bp Feature: domain Description: DUF1566 Location: 84244-84460 bp Feature: domain Description: DUF1566 Location: 84244-84460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_MMR_like (cd07996), DUF772 (pfam05598), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)