myRT

myRT report for GCA_004138245.1_ASM413824v1

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Seq: RZIF01000054.1 (26805 bp)
Overview 1 RT 1: 3715-9365 bp Neighborhood of RT #1 [3715, 9823] InsE PHA02517 RVT-GII GIIM PHA02517 HsdM Feature: gene Location: 3715-4014 bp Feature: domain Description: InsE Location: 3745-4009 bp Feature: domain Description: InsE Location: 3745-4009 bp Feature: gene Location: 4011-4478 bp Feature: domain Description: PHA02517 Location: 4077-4416 bp Feature: domain Description: PHA0251 7 Location: 4077-441 6 bp Feature: gene Location: 5070-6593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5343-6075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5343-6075 bp Feature: domain Description: GIIM Note: maturase Location: 6150-6348 bp Feature: domain Description: GIIM Note: maturase Location: 61 50-6348 bp Feature: gene Location: 6758-7141 bp Feature: domain Description: PHA02517 Location: 6761-7136 bp Feature: domain Description: PHA0251 7 Location: 6761 -71 36 bp Feature: gene Location: 7364-9823 bp Feature: domain Description: HsdM Location: 7421-9365 bp Feature: domain Description: HsdM Location: 7421 -9365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HsdM (COG0286)

Seq: RZIF01000004.1 (177723 bp)
Overview 1 RT 1: 145844-149722 bp Neighborhood of RT #1 [145844, 149727] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 145844-146302 bp Feature: domain Description: dut Location: 145850-146297 bp Feature: domain Description: dut Location: 145850-1462 97 bp Feature: gene Location: 146408-147004 bp Feature: domain Description: slmA Location: 146414-146990 bp Feature: domain Description: slmA Location: 146414-146990 bp Feature: gene Location: 147048-148007 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147183-147732 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147183-147732 bp Feature: gene Location: 148304-148960 bp Feature: domain Description: pyrE Location: 148322-148955 bp Feature: domain Description: pyrE Location: 14832 2 -148955 bp Feature: gene Location: 149011-149727 bp Feature: domain Description: rph Location: 149014-149722 bp Feature: domain Description: rph Location: 149014-14972 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: RZIF01000031.1 (52627 bp)
Overview 1 RT 1: 31371-36867 bp Neighborhood of RT #1 [31371, 36887] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 31371-32291 bp Feature: domain Description: AbiEii Location: 31413-32154 bp Feature: domain Description: AbiEii Location: 3 1413 -3 2154 bp Feature: gene Location: 32278-33060 bp Feature: domain Description: AbiEi_3_N Location: 32284-32551 bp Feature: domain Description: AbiEi_3 _N Location: 3 2284-3 2551 bp Feature: domain Description: AbiEi_3 Location: 32563-33019 bp Feature: domain Description: AbiEi_3 Location: 3 2563 -3 3 019 bp Feature: gene Location: 33377-34474 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 33905-34394 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3 3 905-3 43 94 bp Feature: gene Location: 34520-36586 bp Feature: domain Description: nitrilase Location: 35900-36497 bp Feature: domain Description: nitrilase Location: 3 5900-3 6497 bp Feature: gene Location: 36747-36887 bp Feature: domain Description: Phage_ASH Location: 36771-36867 bp Feature: domain Description: Phage_ASH Location: 3 6771-3 6867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)