myRT

myRT report for GCA_004144375.1_ASM414437v1

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Seq: SEEW01000045.1 (4976 bp)
Overview 1 RT 1: 3-4973 bp Neighborhood of RT #1 [3, 4973] L1-EN RVT-CRISPR-like Feature: gene Location: 3-2756 bp Feature: domain Description: L1-EN Location: 15-495 bp Feature: domain Description: L1 -EN Location: 1 5-495 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1632-2211 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 632-221 1 bp Feature: gene Location: 2903-4396 bp Feature: gene Location: 4809-4973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR

Seq: SEEW01000088.1 (3039 bp)
Overview 1 RT 1: 3-2505 bp Neighborhood of RT #1 [3, 3038] L1-EN RVT-CRISPR-like Feature: gene Location: 3-3038 bp Feature: domain Description: L1-EN Location: 123-882 bp Feature: domain Description: L1-EN Location: 12 3-882 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1887-2505 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1887-2 505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR

Seq: SEEW01000315.1 (1389 bp)
Overview 1 RT 1: 319-1306 bp Neighborhood of RT #1 [319, 1306] RVT-UNC Feature: gene Location: 319-684 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 364-640 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3 64-640 bp Feature: gene Location: 881-1306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR/RVT-UG6(RVT-UNC)

Seq: SEEW01000161.1 (2953 bp)
Overview 1 RT 1: 2-2880 bp Neighborhood of RT #1 [2, 2951] RVT-UNC Feature: gene Location: 2-265 bp Feature: gene Location: 669-863 bp Feature: gene Location: 1389-2951 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2283-2880 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2283-2880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-CRISPR/RVT-GII/RVT-DGRs(RVT-UNC)

Seq: SEEW01000057.1 (4090 bp)
Overview 1 RT 1: 1-3993 bp Neighborhood of RT #1 [1, 4088] R1-I-EN RVT-GII Imm74 Feature: gene Location: 1-2319 bp Feature: domain Description: R1-I-EN Location: 373-817 bp Feature: domain Description: R1-I-EN Location: 373-817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1885-2317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1885 -2317 bp Feature: gene Location: 2319-3623 bp Feature: gene Location: 3789-4088 bp Feature: domain Description: Imm74 Location: 3792-3993 bp Feature: domain Description: Imm74 Location: 3792-3993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-GII, Imm74 (pfam15603)

Seq: SEEW01000046.1 (4836 bp)
Overview 1 RT 1: 3-4833 bp Neighborhood of RT #1 [3, 4833] R1-I-EN RVT-UNC Feature: gene Location: 3-134 bp Feature: gene Location: 141-3254 bp Feature: domain Description: R1-I-EN Location: 543-837 bp Feature: domain Description: R1-I-EN Location: 543-837 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1938-2553 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1938-2553 bp Feature: gene Location: 3278-4546 bp Feature: gene Location: 4687-4833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-AbiA/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: SEEW01000106.1 (2471 bp)
Overview 1 RT 1: 1-1627 bp Neighborhood of RT #1 [1, 2469] RVT-UNC Feature: gene Location: 1-2469 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1012-1627 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1012-1627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: SEEW01000099.1 (2645 bp)
Overview 1 RT 1: 2-2642 bp Neighborhood of RT #1 [2, 2642] RVT-UNC Feature: gene Location: 2-2422 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 806-1424 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 8 06-1424 bp Feature: gene Location: 2511-2642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: SEEW01000118.1 (2201 bp)
Overview 1 RT 1: 1-1018 bp Neighborhood of RT #1 [1, 1779] RVT-UNC Feature: gene Location: 1-1779 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 442-1018 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 442-1018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: SEEW01000039.1 (5720 bp)
Overview 1 RT 1: 536-5718 bp Neighborhood of RT #1 [536, 5718] retropepsin_like RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve CD_CSD Feature: gene Location: 536-4630 bp Feature: domain Description: retropepsin_like Location: 1172-1418 bp Feature: domain Description: retropepsin_like Location: 1172-1418 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2270-2423 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2270-2423 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2744-3092 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2744-3092 bp Feature: domain Description: Integrase_H2C2 Location: 3338-3497 bp Feature: domain Description: Integrase_H2C2 Location: 3338-3497 bp Feature: domain Description: rve Location: 3563-3890 bp Feature: domain Description: rve Location: 3563-3890 bp Feature: domain Description: CD_CSD Location: 4451-4610 bp Feature: domain Description: CD_CSD Location: 4451-4610 bp Feature: gene Location: 4684-5718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG3/RVT-UG26/RVT-UG11(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), CD_CSD (cl28914)

Seq: SEEW01000059.1 (3960 bp)
Overview 1 RT 1: 48-3621 bp Neighborhood of RT #1 [48, 3785] R1-I-EN RVT-UNC Rnase_HI_RT_non_LTR zf-RVT Feature: gene Location: 48-3785 bp Feature: domain Description: R1-I-EN Location: 63-738 bp Feature: domain Description: R1-I-EN Location: 63-738 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1725-2280 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1725-2280 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 2916-3285 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 2916-3285 bp Feature: domain Description: zf-RVT Location: 3498-3621 bp Feature: domain Description: zf-RVT Location: 3498-3621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), Rnase_HI_RT_non_LTR (cd09276), zf-RVT (pfam13966)

Seq: SEEW01000203.1 (1341 bp)
Overview 1 RT 1: 337-634 bp Neighborhood of RT #1 [337, 1338] RVT-GII Feature: gene Location: 337-1338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SEEW01000074.1 (4191 bp)
Overview 1 RT 1: 3-4188 bp Neighborhood of RT #1 [3, 4188] L1-EN RVT-UNC Feature: gene Location: 3-263 bp Feature: gene Location: 403-1137 bp Feature: gene Location: 1109-3175 bp Feature: domain Description: L1-EN Location: 1121-1559 bp Feature: domain Description: L1-EN Location: 1121-1559 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2738-3140 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2738-3140 bp Feature: gene Location: 3259-4188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG10/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: SEEW01000130.1 (3100 bp)
Overview 1 RT 1: 2-1643 bp Neighborhood of RT #1 [2, 2401] RVT-GII Feature: gene Location: 2-2401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1067-1643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1067-1643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SEEW01000062.1 (3878 bp)
Overview 1 RT 1: 1-2663 bp Neighborhood of RT #1 [1, 3736] L1-EN RVT-GII Feature: gene Location: 1-243 bp Feature: gene Location: 332-3736 bp Feature: domain Description: L1-EN Location: 338-1091 bp Feature: domain Description: L1-EN Location: 338-1091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2036-2663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2036-2663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII

Seq: SEEW01000138.1 (2263 bp)
Overview 1 RT 1: 177-1936 bp Neighborhood of RT #1 [177, 2262] RVT-GII Feature: gene Location: 177-650 bp Feature: gene Location: 673-2262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1321-1936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1321-1936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SEEW01000139.1 (2471 bp)
Overview 1 RT 1: 1-2469 bp Neighborhood of RT #1 [1, 2469] RVT-GII Feature: gene Location: 1-1974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397-1018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397-1018 bp Feature: gene Location: 2266-2469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SEEW01000068.1 (3615 bp)
Overview 1 RT 1: 83-2471 bp Neighborhood of RT #1 [83, 3541] L1-EN RVT-UNC Feature: gene Location: 83-3541 bp Feature: domain Description: L1-EN Location: 95-896 bp Feature: domain Description: L1-EN Location: 95-896 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1994-2471 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1994-2471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG27/RVT-GII/RVT-CRISPR(RVT-UNC)