myRT

myRT report for GCA_004144615.1_ASM414461v1

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Seq: SEEN01000415.1 (2353 bp)
Overview 1 RT 1: 287-2145 bp Neighborhood of RT #1 [287, 2282] RVT-GII GIIM Feature: gene Location: 287-601 bp Feature: gene Location: 1068-2282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1215-1848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 5-1 848 bp Feature: domain Description: GIIM Note: maturase Location: 1938-2145 bp Feature: domain Description: GIIM Note: maturase Location: 1 938-21 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SEEN01000026.1 (68035 bp)
Overview 1 RT 1: 31701-35826 bp Neighborhood of RT #1 [31701, 35903] DUF932 RVT-Retrons HipB Feature: gene Location: 31701-31844 bp Feature: gene Location: 31916-32833 bp Feature: domain Description: DUF932 Location: 32114-32798 bp Feature: domain Description: DUF932 Location: 32 114-32 798 bp Feature: gene Location: 32911-34056 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33142-33781 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33142 -33781 bp Feature: gene Location: 34216-35550 bp Feature: gene Location: 35610-35903 bp Feature: domain Description: HipB Location: 35631-35826 bp Feature: domain Description: HipB Location: 35631-3582 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-Retrons, HipB (COG1396)

Seq: SEEN01000095.1 (22103 bp)
Overview 1 RT 1: 14719-19123 bp Neighborhood of RT #1 [14719, 19123] RVT-UG12 Feature: gene Location: 14719-14856 bp Feature: gene Location: 15000-15893 bp Feature: gene Location: 16848-18395 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 17031-17484 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1703 1-17484 bp Feature: gene Location: 18461-18709 bp Feature: gene Location: 18848-19123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12

Seq: SEEN01000103.1 (19106 bp)
Overview 1 RT 1: 3-10711 bp Neighborhood of RT #1 [3, 10842] gyrB dnaG RVT-UNC HipB Feature: gene Location: 3-2267 bp Feature: domain Description: gyrB Location: 9-2265 bp Feature: domain Description: gyrB Location: 9-2265 bp Feature: gene Location: 2552-10048 bp Feature: domain Description: dnaG Location: 2564-3608 bp Feature: domain Description: dnaG Location: 2564 -3608 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4892-5126 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4 892-5126 bp Feature: gene Location: 10103-10231 bp Feature: gene Location: 10420-10842 bp Feature: domain Description: HipB Location: 10432-10711 bp Feature: domain Description: HipB Location: 104 32-10711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gyrB (TIGR01059), dnaG (TIGR01391), RVT-UG10/RVT-UG25/RVT-UG19/RVT-UG24(RVT-UNC), HipB (COG1396)

Seq: SEEN01000598.1 (2048 bp)
Overview 1 RT 1: 3-1855 bp Neighborhood of RT #1 [3, 1855] RVT-GII Feature: gene Location: 3-569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 8-5 67 bp Feature: gene Location: 1550-1855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII