myRT

myRT report for GCA_004144845.1_ASM414484v1

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Seq: SEAX01000108.1 (11228 bp)
Overview 1 RT 1: 3-7099 bp Neighborhood of RT #1 [3, 7185] SWIM RVT-Retrons sbcB COG5340 Feature: gene Location: 3-785 bp Feature: gene Location: 805-2517 bp Feature: domain Description: SWIM Location: 2347-2437 bp Feature: domain Description: SWIM Location: 2347-2437 bp Feature: gene Location: 2912-5038 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3491-4112 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3491 -41 1 2 bp Feature: gene Location: 5053-6498 bp Feature: domain Description: sbcB Note: exonuclease Location: 5062-6484 bp Feature: domain Description: sbcB Note: exonuclease Location: 5062-6484 bp Feature: gene Location: 6580-7185 bp Feature: domain Description: COG5340 Location: 6676-7099 bp Feature: domain Description: COG5340 Location: 6676-7099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SWIM (pfam04434), RVT-Retrons, sbcB (PRK11779), COG5340 (Transcriptional regulator, predicted component of viral defense system )

Seq: SEAX01002930.1 (1181 bp)
Overview 1 RT 1: 108-1178 bp Neighborhood of RT #1 [108, 1180] RVT-GII GIIM Feature: gene Location: 108-461 bp Feature: gene Location: 572-769 bp Feature: gene Location: 782-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-968 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1178 bp Feature: domain Description: GIIM Note: maturase Location: 102 8-1178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)