myRT

myRT report for GCA_004150295.1_ASM415029v1

Download annotations/find similar RTs

Seq: RYZX01000001.1 (303445 bp)
Overview 1 RT 1: 220466-224817 bp Neighborhood of RT #1 [220466, 224819] GtrA TmCorA-like_u2 2A0114 RVT-GII MFS_ExuT_GudP_like PRK14017 Feature: gene Location: 220466-220855 bp Feature: domain Description: GtrA Location: 220505-220847 bp Feature: domain Description: GtrA Location: 220505-220847 bp Feature: gene Location: 221116-222075 bp Feature: domain Description: TmCorA-like_u2 Location: 221200-222061 bp Feature: domain Description: TmCorA-like_u2 Location: 221 200-222061 bp Feature: gene Location: 222122-223228 bp Feature: domain Description: 2A0114 Location: 222134-222440 bp Feature: domain Description: 2A01 1 4 Location: 2221 34-222440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222536-223190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222536-2231 90 bp Feature: gene Location: 223356-224036 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 223392-224013 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 223392-22401 3 bp Feature: gene Location: 224130-224819 bp Feature: domain Description: PRK14017 Location: 224133-224817 bp Feature: domain Description: PRK1 401 7 Location: 2241 33-22481 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RYZX01000022.1 (9452 bp)
Overview 1 RT 1: 2747-6949 bp Neighborhood of RT #1 [2747, 6969] RVT_N RVT-GII GIIM RpoE Feature: gene Location: 2747-3358 bp Feature: gene Location: 3388-3522 bp Feature: gene Location: 3925-5610 bp Feature: domain Description: RVT_N Location: 4009-4255 bp Feature: domain Description: RVT_N Location: 4009-42 55 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4309-4969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4309-4969 bp Feature: domain Description: GIIM Note: maturase Location: 5035-5269 bp Feature: domain Description: GIIM Note: maturase Location: 5035-52 69 bp Feature: gene Location: 5835-6284 bp Feature: gene Location: 6463-6969 bp Feature: domain Description: RpoE Location: 6493-6949 bp Feature: domain Description: RpoE Location: 6493-6949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RYZX01000025.1 (27538 bp)
Overview 1 RT 1: 3-2018 bp 2 RT 2: 24306-27195 bp Neighborhood of RT #1 [3, 2018] RVT-GII GIIM PHA00542 Neighborhood of RT #2 [24306, 27536] SrmB SrmB RVT-GII GIIM Feature: gene Location: 3-989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-612 bp Feature: domain Description: GIIM Note: maturase Location: 678-912 bp Feature: domain Description: GIIM Note: maturase Location: 678-912 bp Feature: gene Location: 1010-1273 bp Feature: domain Description: PHA00542 Location: 1109-1217 bp Feature: domain Description: PHA00542 Location: 1109-1217 bp Feature: gene Location: 1497-2018 bp Feature: gene Location: 24306-24827 bp Feature: domain Description: SrmB Location: 24309-24813 bp Feature: domain Description: SrmB Location: 243 09-24813 bp Feature: gene Location: 24860-25780 bp Feature: domain Description: SrmB Location: 24905-25766 bp Feature: domain Description: SrmB Location: 24905-25766 bp Feature: gene Location: 26283-27536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26286-26895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26286-26895 bp Feature: domain Description: GIIM Note: maturase Location: 26961-27195 bp Feature: domain Description: GIIM Note: maturase Location: 26961-27195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RYZX01000027.1 (815017 bp)
Overview 1 RT 1: 722168-726327 bp Neighborhood of RT #1 [722168, 726327] YesE AcrR RVT_N RVT-GII GIIM Feature: gene Location: 722168-722650 bp Feature: domain Description: YesE Location: 722213-722603 bp Feature: domain Description: YesE Location: 722213-722603 bp Feature: gene Location: 722801-723385 bp Feature: domain Description: AcrR Location: 722843-723251 bp Feature: domain Description: AcrR Location: 72284 3-723251 bp Feature: gene Location: 723906-725555 bp Feature: domain Description: RVT_N Location: 723954-724200 bp Feature: domain Description: RVT_N Location: 723954 -724 200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 724254-724914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 724 254 -724 914 bp Feature: domain Description: GIIM Note: maturase Location: 724983-725214 bp Feature: domain Description: GIIM Note: maturase Location: 724 983-725214 bp Feature: gene Location: 725615-725800 bp Feature: gene Location: 726181-726327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RYZX01000059.1 (1131 bp)
Overview 1 RT 1: 572-1127 bp Neighborhood of RT #1 [572, 1129] RVT_N RVT-GII Feature: gene Location: 572-1129 bp Feature: domain Description: RVT_N Location: 656-902 bp Feature: domain Description: RVT_N Location: 65 6-902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 956-1127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 6-1127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT