myRT

myRT report for GCA_004151765.1_ASM415176v1

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Seq: SEMW01000021.1 (34667 bp)
Overview 1 RT 1: 11420-16474 bp Neighborhood of RT #1 [11420, 16474] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 11420-11923 bp Feature: domain Description: ArdA Location: 11438-11909 bp Feature: domain Description: ArdA Location: 1 1 438-1 1 909 bp Feature: gene Location: 11925-12134 bp Feature: gene Location: 12264-14174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12597-13335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2597-1 3335 bp Feature: domain Description: HNHc Note: nucleases Location: 13890-14055 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3890-1 4055 bp Feature: gene Location: 15054-16238 bp Feature: domain Description: HTH_XRE Location: 15084-15228 bp Feature: domain Description: HTH_XRE Location: 1 5084-1 5228 bp Feature: domain Description: Rol_Rep_N Location: 15261-15525 bp Feature: domain Description: Rol_Rep_N Location: 1 5261 -1 5525 bp Feature: domain Description: Rep_trans Location: 15549-16161 bp Feature: domain Description: Rep_trans Location: 1 5549-1 61 61 bp Feature: gene Location: 16331-16474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: SEMW01000050.1 (17729 bp)
Overview 1 RT 1: 6459-11739 bp Neighborhood of RT #1 [6459, 12431] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 6459-7664 bp Feature: domain Description: Glucosaminidase Location: 6735-7131 bp Feature: domain Description: Glucosaminidase Location: 6735-7131 bp Feature: domain Description: Peptidase_M23 Location: 7308-7545 bp Feature: domain Description: Peptidase_M2 3 Location: 7308-7545 bp Feature: gene Location: 7664-7984 bp Feature: gene Location: 8172-10049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8487-9225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8487-92 2 5 bp Feature: domain Description: HNHc Note: nucleases Location: 9783-9936 bp Feature: domain Description: HNHc Note: nucleases Location: 9783-9936 bp Feature: gene Location: 10236-10469 bp Feature: gene Location: 10737-12431 bp Feature: domain Description: VirB4 Location: 11055-11739 bp Feature: domain Description: VirB4 Location: 11055-11739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: SEMW01000119.1 (3374 bp)
Overview 1 RT 1: 40-3299 bp Neighborhood of RT #1 [40, 3331] RVT-AbiP2 HsdM Feature: gene Location: 40-1515 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 88-853 bp Feature: gene Location: 1853-3331 bp Feature: domain Description: HsdM Location: 1874-3299 bp Feature: domain Description: HsdM Location: 1874-3 299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)