myRT

myRT report for GCA_004151875.1_ASM415187v1

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Seq: SENE01000119.1 (3374 bp)
Overview 1 RT 1: 44-2673 bp Neighborhood of RT #1 [44, 3335] HsdM RVT-AbiP2 Feature: gene Location: 44-1522 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: domain Description: HsdM Location: 65-1 490 bp Feature: gene Location: 1860-3335 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SENE01000026.1 (31923 bp)
Overview 1 RT 1: 6911-11308 bp Neighborhood of RT #1 [6911, 12000] MazE RVT-GII HNHc VirB4 Feature: gene Location: 6911-7174 bp Feature: domain Description: MazE Location: 6932-7169 bp Feature: domain Description: MazE Location: 6932 -7169 bp Feature: gene Location: 7233-7553 bp Feature: gene Location: 7741-9618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8056-8794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8056-8794 bp Feature: domain Description: HNHc Note: nucleases Location: 9352-9505 bp Feature: domain Description: HNHc Note: nucleases Location: 9352 -9505 bp Feature: gene Location: 9805-10038 bp Feature: gene Location: 10306-12000 bp Feature: domain Description: VirB4 Location: 10624-11308 bp Feature: domain Description: VirB4 Location: 1062 4-11308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazE (COG2336), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: SENE01000020.1 (39451 bp)
Overview 1 RT 1: 16204-21258 bp Neighborhood of RT #1 [16204, 21258] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 16204-16707 bp Feature: domain Description: ArdA Location: 16222-16693 bp Feature: domain Description: ArdA Location: 16222-16693 bp Feature: gene Location: 16709-16918 bp Feature: gene Location: 17048-18958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17381-18119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173 81-18119 bp Feature: domain Description: HNHc Note: nucleases Location: 18674-18839 bp Feature: domain Description: HNHc Note: nucleases Location: 18674-1883 9 bp Feature: gene Location: 19838-21022 bp Feature: domain Description: HTH_XRE Location: 19868-20012 bp Feature: domain Description: HTH_XRE Location: 19868-20012 bp Feature: domain Description: Rol_Rep_N Location: 20045-20309 bp Feature: domain Description: Rol_Rep_N Location: 20045-203 09 bp Feature: domain Description: Rep_trans Location: 20333-20945 bp Feature: domain Description: Rep_trans Location: 203 3 3 -20945 bp Feature: gene Location: 21115-21258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)