myRT

myRT report for GCA_004151885.1_ASM415188v1

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Seq: SENG01000048.1 (15684 bp)
Overview 1 RT 1: 10984-15608 bp Neighborhood of RT #1 [10984, 15631] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII Feature: gene Location: 10984-12369 bp Feature: domain Description: FtsK Location: 11596-12226 bp Feature: domain Description: FtsK Location: 1 1 596-1 2226 bp Feature: gene Location: 12548-13753 bp Feature: domain Description: HTH_XRE Location: 12593-12737 bp Feature: domain Description: HTH_XRE Location: 1 2593-1 2737 bp Feature: domain Description: Rol_Rep_N Location: 12764-13031 bp Feature: domain Description: Rol_Rep_N Location: 1 2764-1 3031 bp Feature: domain Description: Rep_trans Location: 13055-13664 bp Feature: domain Description: Rep_trans Location: 1 3055-1 3664 bp Feature: gene Location: 14537-15631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14870-15608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4870-1 5608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII

Seq: SENG01000125.1 (3373 bp)
Overview 1 RT 1: 43-2672 bp Neighborhood of RT #1 [43, 3334] HsdM RVT-AbiP2 Feature: gene Location: 43-1521 bp Feature: domain Description: HsdM Location: 64-1489 bp Feature: domain Description: HsdM Location: 64-1489 bp Feature: gene Location: 1859-3334 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2207-2672 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 07-2 672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SENG01000134.1 (2744 bp)
Overview 1 RT 1: 3-2658 bp Neighborhood of RT #1 [3, 2658] RVT-GII HNHc Feature: gene Location: 3-173 bp Feature: gene Location: 361-2238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676-1414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676-1414 bp Feature: domain Description: HNHc Note: nucleases Location: 1972-2125 bp Feature: domain Description: HNHc Note: nucleases Location: 1972-2125 bp Feature: gene Location: 2425-2658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)