myRT

myRT report for GCA_004151895.1_ASM415189v1

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Seq: SENH01000056.1 (17729 bp)
Overview 1 RT 1: 6459-11739 bp Neighborhood of RT #1 [6459, 12431] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 6459-7664 bp Feature: domain Description: Glucosaminidase Location: 6735-7131 bp Feature: domain Description: Glucosaminidase Location: 6735-71 31 bp Feature: domain Description: Peptidase_M23 Location: 7308-7545 bp Feature: domain Description: Peptidase_M23 Location: 7308-7545 bp Feature: gene Location: 7664-7984 bp Feature: gene Location: 8172-10049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8487-9225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8487-9225 bp Feature: domain Description: HNHc Note: nucleases Location: 9783-9936 bp Feature: domain Description: HNHc Note: nucleases Location: 9783-9936 bp Feature: gene Location: 10236-10469 bp Feature: gene Location: 10737-12431 bp Feature: domain Description: VirB4 Location: 11055-11739 bp Feature: domain Description: VirB4 Location: 1 1 055-1 1 739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: SENH01000020.1 (38839 bp)
Overview 1 RT 1: 15592-20646 bp Neighborhood of RT #1 [15592, 20646] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 15592-16095 bp Feature: domain Description: ArdA Location: 15610-16081 bp Feature: domain Description: ArdA Location: 15610-16081 bp Feature: gene Location: 16097-16306 bp Feature: gene Location: 16436-18346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16769-17507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16769-17507 bp Feature: domain Description: HNHc Note: nucleases Location: 18062-18227 bp Feature: domain Description: HNHc Note: nucleases Location: 18062 -182 2 7 bp Feature: gene Location: 19226-20410 bp Feature: domain Description: HTH_XRE Location: 19256-19400 bp Feature: domain Description: HTH_XRE Location: 192 56-19400 bp Feature: domain Description: Rol_Rep_N Location: 19433-19697 bp Feature: domain Description: Rol_Rep_N Location: 19433-19697 bp Feature: domain Description: Rep_trans Location: 19721-20333 bp Feature: domain Description: Rep_trans Location: 1972 1-2 0333 bp Feature: gene Location: 20503-20646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: SENH01000133.1 (3374 bp)
Overview 1 RT 1: 44-2673 bp Neighborhood of RT #1 [44, 3335] HsdM RVT-AbiP2 Feature: gene Location: 44-1522 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: gene Location: 1860-3335 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2