myRT

myRT report for GCA_004151925.1_ASM415192v1

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Seq: SENF01000120.1 (3374 bp)
Overview 1 RT 1: 40-3299 bp Neighborhood of RT #1 [40, 3331] RVT-AbiP2 HsdM Feature: gene Location: 40-1515 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: gene Location: 1853-3331 bp Feature: domain Description: HsdM Location: 1874-3299 bp Feature: domain Description: HsdM Location: 1 874-3299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: SENF01000026.1 (31923 bp)
Overview 1 RT 1: 19924-25008 bp Neighborhood of RT #1 [19924, 25013] VirB4 RVT-GII HNHc MazE Feature: gene Location: 19924-21618 bp Feature: domain Description: VirB4 Location: 20242-20926 bp Feature: domain Description: VirB4 Location: 2 02 42 -2 092 6 bp Feature: gene Location: 21886-22119 bp Feature: gene Location: 22306-24183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22621-23359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 62 1-2 3359 bp Feature: domain Description: HNHc Note: nucleases Location: 23917-24070 bp Feature: domain Description: HNHc Note: nucleases Location: 2 3917-2 4070 bp Feature: gene Location: 24371-24691 bp Feature: gene Location: 24750-25013 bp Feature: domain Description: MazE Location: 24771-25008 bp Feature: domain Description: MazE Location: 2 4771-2 5008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), MazE (COG2336)

Seq: SENF01000020.1 (39451 bp)
Overview 1 RT 1: 17881-23234 bp Neighborhood of RT #1 [17881, 23248] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 17881-18171 bp Feature: gene Location: 18430-19614 bp Feature: domain Description: HTH_XRE Location: 18460-18604 bp Feature: domain Description: HTH_XRE Location: 18460-18604 bp Feature: domain Description: Rol_Rep_N Location: 18637-18901 bp Feature: domain Description: Rol_Rep_N Location: 1863 7-18901 bp Feature: domain Description: Rep_trans Location: 18925-19537 bp Feature: domain Description: Rep_trans Location: 18925-1953 7 bp Feature: gene Location: 20494-22404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20827-21565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20827-21565 bp Feature: domain Description: HNHc Note: nucleases Location: 22120-22285 bp Feature: domain Description: HNHc Note: nucleases Location: 22120-22285 bp Feature: gene Location: 22592-22732 bp Feature: gene Location: 22745-23248 bp Feature: domain Description: ArdA Location: 22763-23234 bp Feature: domain Description: ArdA Location: 22763 -23 23 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)