myRT

myRT report for GCA_004151965.1_ASM415196v1

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Seq: SENJ01000125.1 (3376 bp)
Overview 1 RT 1: 46-2675 bp Neighborhood of RT #1 [46, 3337] HsdM RVT-AbiP2 Feature: gene Location: 46-1524 bp Feature: domain Description: HsdM Location: 67-1492 bp Feature: domain Description: HsdM Location: 67-1 492 bp Feature: gene Location: 1862-3337 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2210-2675 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 221 0-2675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SENJ01000145.1 (1700 bp)
Overview 1 RT 1: 131-1580 bp Neighborhood of RT #1 [131, 1699] RVT-GII HNHc Feature: gene Location: 131-1699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-860 bp Feature: domain Description: HNHc Note: nucleases Location: 1415-1580 bp Feature: domain Description: HNHc Note: nucleases Location: 1415-1580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: SENJ01000005.1 (87435 bp)
Overview 1 RT 1: 65694-72526 bp Neighborhood of RT #1 [65694, 72534] PRK13354 CE4_DAC_u3_5s RVT-GII GIIM AcrR CcmA Feature: gene Location: 65694-66950 bp Feature: domain Description: PRK13354 Location: 65697-66942 bp Feature: domain Description: PRK13 3 54 Location: 65697-66942 bp Feature: gene Location: 67506-68831 bp Feature: domain Description: CE4_DAC_u3_5s Location: 68199-68592 bp Feature: domain Description: CE4_DAC_u3 _5s Location: 68199-68592 bp Feature: gene Location: 68924-70312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69245-69860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69245-69860 bp Feature: domain Description: GIIM Note: maturase Location: 69917-70133 bp Feature: domain Description: GIIM Note: maturase Location: 69917-7013 3 bp Feature: gene Location: 70799-71398 bp Feature: domain Description: AcrR Location: 70817-71303 bp Feature: domain Description: AcrR Location: 70817-713 03 bp Feature: gene Location: 71653-72534 bp Feature: domain Description: CcmA Location: 71656-72526 bp Feature: domain Description: CcmA Location: 71656-72526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13354 (tyrosyl-tRNA synthetase; Provisional), CE4_DAC_u3_5s (cd10972), RVT-GII, GIIM (pfam08388), AcrR (COG1309), CcmA (COG4133)

Seq: SENJ01000073.1 (11409 bp)
Overview 1 RT 1: 2468-6764 bp Neighborhood of RT #1 [2468, 6772] DUF3841 RVT-AbiP2 AlbA_2 PRK09290 Feature: gene Location: 2468-2617 bp Feature: gene Location: 2784-3263 bp Feature: domain Description: DUF3841 Location: 2793-3168 bp Feature: domain Description: DUF384 1 Location: 2793-3168 bp Feature: gene Location: 3441-4937 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3849-4305 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 384 9-4 305 bp Feature: gene Location: 5083-5397 bp Feature: domain Description: AlbA_2 Location: 5122-5299 bp Feature: domain Description: AlbA_2 Location: 5122-5299 bp Feature: gene Location: 5498-6772 bp Feature: domain Description: PRK09290 Location: 5516-6764 bp Feature: domain Description: PRK09290 Location: 5516-6764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3841 (pfam12952), RVT-AbiP2, AlbA_2 (pfam04326), PRK09290 (allantoate amidohydrolase; Reviewed)

Seq: SENJ01000134.1 (2714 bp)
Overview 1 RT 1: 123-2331 bp Neighborhood of RT #1 [123, 2331] RVT-GII HNHc Feature: gene Location: 123-1982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1173 bp Feature: domain Description: HNHc Note: nucleases Location: 1728-1866 bp Feature: domain Description: HNHc Note: nucleases Location: 1728-1866 bp Feature: gene Location: 2101-2331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: SENJ01000135.1 (2685 bp)
Overview 1 RT 1: 115-1072 bp Neighborhood of RT #1 [115, 1899] RVT-GII Feature: gene Location: 115-1899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII