myRT

myRT report for GCA_004151975.1_ASM415197v1

Download annotations/find similar RTs

Seq: SENK01000132.1 (2714 bp)
Overview 1 RT 1: 384-2476 bp Neighborhood of RT #1 [384, 2592] RVT-GII HNHc Feature: gene Location: 384-614 bp Feature: gene Location: 733-2592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042-1783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 042-1 783 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2476 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: SENK01000123.1 (3376 bp)
Overview 1 RT 1: 46-2675 bp Neighborhood of RT #1 [46, 3337] HsdM RVT-AbiP2 Feature: gene Location: 46-1524 bp Feature: domain Description: HsdM Location: 67-1492 bp Feature: domain Description: HsdM Location: 67-1492 bp Feature: gene Location: 1862-3337 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2210-2675 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 10-2 675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SENK01000070.1 (11409 bp)
Overview 1 RT 1: 4638-8942 bp Neighborhood of RT #1 [4638, 8942] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 Feature: gene Location: 4638-5912 bp Feature: domain Description: PRK09290 Location: 4656-5904 bp Feature: domain Description: PRK09290 Location: 4656-5904 bp Feature: gene Location: 6013-6327 bp Feature: domain Description: AlbA_2 Location: 6052-6229 bp Feature: domain Description: AlbA_2 Location: 6052-6229 bp Feature: gene Location: 6473-7969 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6881-7337 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6881-73 3 7 bp Feature: gene Location: 8147-8626 bp Feature: domain Description: DUF3841 Location: 8156-8531 bp Feature: domain Description: DUF3 841 Location: 8156-853 1 bp Feature: gene Location: 8793-8942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952)

Seq: SENK01000133.1 (2685 bp)
Overview 1 RT 1: 115-1072 bp Neighborhood of RT #1 [115, 1899] RVT-GII Feature: gene Location: 115-1899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SENK01000143.1 (1700 bp)
Overview 1 RT 1: 131-1580 bp Neighborhood of RT #1 [131, 1699] RVT-GII HNHc Feature: gene Location: 131-1699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-860 bp Feature: domain Description: HNHc Note: nucleases Location: 1415-1580 bp Feature: domain Description: HNHc Note: nucleases Location: 1415 -15 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: SENK01000006.1 (87426 bp)
Overview 1 RT 1: 65685-72517 bp Neighborhood of RT #1 [65685, 72525] PRK13354 CE4_DAC_u3_5s RVT-GII GIIM AcrR CcmA Feature: gene Location: 65685-66941 bp Feature: domain Description: PRK13354 Location: 65688-66933 bp Feature: domain Description: PRK13354 Location: 6 56 88-6 6 933 bp Feature: gene Location: 67497-68822 bp Feature: domain Description: CE4_DAC_u3_5s Location: 68190-68583 bp Feature: domain Description: CE4_DAC_u3_5s Location: 6 8190-6 8583 bp Feature: gene Location: 68915-70303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69236-69851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 9236 -6 9851 bp Feature: domain Description: GIIM Note: maturase Location: 69908-70124 bp Feature: domain Description: GIIM Note: maturase Location: 6 9908-70124 bp Feature: gene Location: 70790-71389 bp Feature: domain Description: AcrR Location: 70808-71294 bp Feature: domain Description: AcrR Location: 70808-71294 bp Feature: gene Location: 71644-72525 bp Feature: domain Description: CcmA Location: 71647-72517 bp Feature: domain Description: CcmA Location: 716 47-72517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13354 (tyrosyl-tRNA synthetase; Provisional), CE4_DAC_u3_5s (cd10972), RVT-GII, GIIM (pfam08388), AcrR (COG1309), CcmA (COG4133)