myRT

myRT report for GCA_004152165.1_ASM415216v1

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Seq: SENW01000153.1 (1901 bp)
Overview 1 RT 1: 437-1646 bp Neighborhood of RT #1 [437, 1825] RVT-GII GIIM Feature: gene Location: 437-1825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-1373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-1 373 bp Feature: domain Description: GIIM Note: maturase Location: 1430-1646 bp Feature: domain Description: GIIM Note: maturase Location: 1 430-1 646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SENW01000027.1 (32352 bp)
Overview 1 RT 1: 5676-10414 bp Neighborhood of RT #1 [5676, 10491] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 5676-6176 bp Feature: domain Description: ArdA Location: 5694-6165 bp Feature: domain Description: ArdA Location: 5694-6165 bp Feature: gene Location: 6189-6341 bp Feature: gene Location: 6517-8427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6850-7588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6850-7588 bp Feature: domain Description: HNHc Note: nucleases Location: 8143-8308 bp Feature: domain Description: HNHc Note: nucleases Location: 8143-8308 bp Feature: gene Location: 8936-9085 bp Feature: gene Location: 9307-10491 bp Feature: domain Description: HTH_XRE Location: 9337-9481 bp Feature: domain Description: HTH_XRE Location: 9337-9481 bp Feature: domain Description: Rol_Rep_N Location: 9514-9778 bp Feature: domain Description: Rol_Rep_N Location: 9514-9778 bp Feature: domain Description: Rep_trans Location: 9802-10414 bp Feature: domain Description: Rep_trans Location: 9802 -10414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: SENW01000132.1 (3374 bp)
Overview 1 RT 1: 44-2673 bp Neighborhood of RT #1 [44, 3335] HsdM RVT-AbiP2 Feature: gene Location: 44-1522 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: gene Location: 1860-3335 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SENW01000021.1 (43628 bp)
Overview 1 RT 1: 23260-29113 bp Neighborhood of RT #1 [23260, 29232] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 23260-24954 bp Feature: domain Description: VirB4 Location: 23578-24262 bp Feature: domain Description: VirB4 Location: 23578-24 262 bp Feature: gene Location: 25222-25455 bp Feature: gene Location: 25642-27519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25957-26695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25957-26695 bp Feature: domain Description: HNHc Note: nucleases Location: 27253-27406 bp Feature: domain Description: HNHc Note: nucleases Location: 27253-274 06 bp Feature: gene Location: 27707-28027 bp Feature: gene Location: 28027-29232 bp Feature: domain Description: Glucosaminidase Location: 28303-28699 bp Feature: domain Description: Glucosaminidase Location: 28303-28699 bp Feature: domain Description: Peptidase_M23 Location: 28876-29113 bp Feature: domain Description: Peptidase_M23 Location: 28876-29113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)