myRT

myRT report for GCA_004152205.1_ASM415220v1

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Seq: SEOC01000095.1 (7004 bp)
Overview 1 RT 1: 151-4048 bp Neighborhood of RT #1 [151, 4125] RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 151-2061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1 222 bp Feature: domain Description: HNHc Note: nucleases Location: 1777-1942 bp Feature: domain Description: HNHc Note: nucleases Location: 1 777-1 942 bp Feature: gene Location: 2570-2719 bp Feature: gene Location: 2941-4125 bp Feature: domain Description: HTH_XRE Location: 2971-3115 bp Feature: domain Description: HTH_XRE Location: 2971 -31 1 5 bp Feature: domain Description: Rol_Rep_N Location: 3148-3412 bp Feature: domain Description: Rol_Rep_N Location: 31 48-341 2 bp Feature: domain Description: Rep_trans Location: 3436-4048 bp Feature: domain Description: Rep_trans Location: 3436-4048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: SEOC01000033.1 (23957 bp)
Overview 1 RT 1: 197-3896 bp Neighborhood of RT #1 [197, 3916] RVT-GII HNHc FtsK Feature: gene Location: 197-2056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506-1247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506-12 47 bp Feature: domain Description: HNHc Note: nucleases Location: 1802-1940 bp Feature: domain Description: HNHc Note: nucleases Location: 1802 -1940 bp Feature: gene Location: 2175-2405 bp Feature: gene Location: 2771-3916 bp Feature: domain Description: FtsK Location: 3431-3896 bp Feature: domain Description: FtsK Location: 3431-3896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674)

Seq: SEOC01000128.1 (3375 bp)
Overview 1 RT 1: 45-2674 bp Neighborhood of RT #1 [45, 3336] HsdM RVT-AbiP2 Feature: gene Location: 45-1523 bp Feature: domain Description: HsdM Location: 66-1491 bp Feature: domain Description: HsdM Location: 66-1491 bp Feature: gene Location: 1861-3336 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2209-2674 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2209-2674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2