myRT

myRT report for GCA_004152325.1_ASM415232v1

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Seq: SEMP01000008.1 (79910 bp)
Overview 1 RT 1: 25121-31321 bp Neighborhood of RT #1 [25121, 31321] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 25121-26347 bp Feature: domain Description: INT_ICEBs1_C_like Location: 25724-26279 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 25724-26279 bp Feature: gene Location: 26936-28384 bp Feature: domain Description: COG2865 Location: 26942-28340 bp Feature: domain Description: COG2865 Location: 26942-28340 bp Feature: gene Location: 28530-30026 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 28938-29394 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 28938-29394 bp Feature: gene Location: 30198-30434 bp Feature: domain Description: HTH_XRE Location: 30240-30426 bp Feature: domain Description: HTH_XRE Location: 30240-30426 bp Feature: gene Location: 30548-31321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)

Seq: SEMP01000107.1 (2761 bp)
Overview 1 RT 1: 131-1922 bp Neighborhood of RT #1 [131, 2041] RVT-GII HNHc Feature: gene Location: 131-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-12 02 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-192 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: SEMP01000101.1 (3373 bp)
Overview 1 RT 1: 40-3299 bp Neighborhood of RT #1 [40, 3331] RVT-AbiP2 HsdM Feature: gene Location: 40-1515 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 88-853 bp Feature: gene Location: 1853-3331 bp Feature: domain Description: HsdM Location: 1874-3299 bp Feature: domain Description: HsdM Location: 1874-3 299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)