myRT

myRT report for GCA_004152405.1_ASM415240v1

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Seq: SENI01000056.1 (17729 bp)
Overview 1 RT 1: 6459-11739 bp Neighborhood of RT #1 [6459, 12431] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 6459-7664 bp Feature: domain Description: Glucosaminidase Location: 6735-7131 bp Feature: domain Description: Glucosaminidase Location: 6735-71 31 bp Feature: domain Description: Peptidase_M23 Location: 7308-7545 bp Feature: domain Description: Peptidase_M23 Location: 7308-7545 bp Feature: gene Location: 7664-7984 bp Feature: gene Location: 8172-10049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8487-9225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8487-9225 bp Feature: domain Description: HNHc Note: nucleases Location: 9783-9936 bp Feature: domain Description: HNHc Note: nucleases Location: 9783-9936 bp Feature: gene Location: 10236-10469 bp Feature: gene Location: 10737-12431 bp Feature: domain Description: VirB4 Location: 11055-11739 bp Feature: domain Description: VirB4 Location: 1 1 055-1 1 739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: SENI01000132.1 (3374 bp)
Overview 1 RT 1: 44-2673 bp Neighborhood of RT #1 [44, 3335] HsdM RVT-AbiP2 Feature: gene Location: 44-1522 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: gene Location: 1860-3335 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 08-2 673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SENI01000020.1 (38843 bp)
Overview 1 RT 1: 17881-23234 bp Neighborhood of RT #1 [17881, 23248] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 17881-18171 bp Feature: gene Location: 18430-19614 bp Feature: domain Description: HTH_XRE Location: 18460-18604 bp Feature: domain Description: HTH_XRE Location: 18460-18604 bp Feature: domain Description: Rol_Rep_N Location: 18637-18901 bp Feature: domain Description: Rol_Rep_N Location: 1863 7-18901 bp Feature: domain Description: Rep_trans Location: 18925-19537 bp Feature: domain Description: Rep_trans Location: 18925-1953 7 bp Feature: gene Location: 20494-22404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20827-21565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20827-21565 bp Feature: domain Description: HNHc Note: nucleases Location: 22120-22285 bp Feature: domain Description: HNHc Note: nucleases Location: 22120-22285 bp Feature: gene Location: 22592-22732 bp Feature: gene Location: 22745-23248 bp Feature: domain Description: ArdA Location: 22763-23234 bp Feature: domain Description: ArdA Location: 22763 -23 23 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)