myRT

myRT report for GCA_004152465.1_ASM415246v1

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Seq: SENO01000161.1 (3374 bp)
Overview 1 RT 1: 44-2673 bp Neighborhood of RT #1 [44, 3335] HsdM RVT-AbiP2 Feature: gene Location: 44-1522 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: domain Description: HsdM Location: 65-1 490 bp Feature: gene Location: 1860-3335 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SENO01000046.1 (18339 bp)
Overview 1 RT 1: 197-3896 bp Neighborhood of RT #1 [197, 3916] RVT-GII HNHc FtsK Feature: gene Location: 197-2056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506-1247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506-12 47 bp Feature: domain Description: HNHc Note: nucleases Location: 1802-1940 bp Feature: domain Description: HNHc Note: nucleases Location: 1802 -1940 bp Feature: gene Location: 2175-2405 bp Feature: gene Location: 2771-3916 bp Feature: domain Description: FtsK Location: 3431-3896 bp Feature: domain Description: FtsK Location: 3431-3896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674)

Seq: SENO01000109.1 (7004 bp)
Overview 1 RT 1: 151-4048 bp Neighborhood of RT #1 [151, 4125] RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 151-2061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1222 bp Feature: domain Description: HNHc Note: nucleases Location: 1777-1942 bp Feature: domain Description: HNHc Note: nucleases Location: 1777-1942 bp Feature: gene Location: 2570-2719 bp Feature: gene Location: 2941-4125 bp Feature: domain Description: HTH_XRE Location: 2971-3115 bp Feature: domain Description: HTH_XRE Location: 2971-3 115 bp Feature: domain Description: Rol_Rep_N Location: 3148-3412 bp Feature: domain Description: Rol_Rep_N Location: 3 148-3 412 bp Feature: domain Description: Rep_trans Location: 3436-4048 bp Feature: domain Description: Rep_trans Location: 3 43 6-4048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: SENO01000069.1 (12392 bp)
Overview 1 RT 1: 1123-6403 bp Neighborhood of RT #1 [1123, 7095] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 1123-2328 bp Feature: domain Description: Glucosaminidase Location: 1399-1795 bp Feature: domain Description: Glucosaminidase Location: 1399-1795 bp Feature: domain Description: Peptidase_M23 Location: 1972-2209 bp Feature: domain Description: Peptidase_M23 Location: 1972-2209 bp Feature: gene Location: 2328-2648 bp Feature: gene Location: 2836-4713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3151-3889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3151-3889 bp Feature: domain Description: HNHc Note: nucleases Location: 4447-4600 bp Feature: domain Description: HNHc Note: nucleases Location: 4 4 4 7-4 600 bp Feature: gene Location: 4900-5133 bp Feature: gene Location: 5401-7095 bp Feature: domain Description: VirB4 Location: 5719-6403 bp Feature: domain Description: VirB4 Location: 5719-64 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)