myRT

myRT report for GCA_004152505.1_ASM415250v1

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Seq: SENY01000096.1 (7004 bp)
Overview 1 RT 1: 2644-6735 bp Neighborhood of RT #1 [2644, 6854] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc Feature: gene Location: 2644-2787 bp Feature: gene Location: 2880-4064 bp Feature: domain Description: HTH_XRE Location: 2910-3054 bp Feature: domain Description: HTH_XRE Location: 291 0-3054 bp Feature: domain Description: Rol_Rep_N Location: 3087-3351 bp Feature: domain Description: Rol_Rep_N Location: 3087-3351 bp Feature: domain Description: Rep_trans Location: 3375-3987 bp Feature: domain Description: Rep_trans Location: 3375-3987 bp Feature: gene Location: 4944-6854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5277-6015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5277-601 5 bp Feature: domain Description: HNHc Note: nucleases Location: 6570-6735 bp Feature: domain Description: HNHc Note: nucleases Location: 6570-6735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507)

Seq: SENY01000033.1 (23957 bp)
Overview 1 RT 1: 20042-23645 bp Neighborhood of RT #1 [20042, 23761] FtsK RVT-GII HNHc Feature: gene Location: 20042-21187 bp Feature: domain Description: FtsK Location: 20702-21167 bp Feature: domain Description: FtsK Location: 2 0702 -2 1167 bp Feature: gene Location: 21553-21783 bp Feature: gene Location: 21902-23761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22211-22952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 2 11-2 2 952 bp Feature: domain Description: HNHc Note: nucleases Location: 23507-23645 bp Feature: domain Description: HNHc Note: nucleases Location: 2 3507-2 3645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), RVT-GII, HNHc (smart00507)

Seq: SENY01000125.1 (3375 bp)
Overview 1 RT 1: 45-2674 bp Neighborhood of RT #1 [45, 3336] HsdM RVT-AbiP2 Feature: gene Location: 45-1523 bp Feature: domain Description: HsdM Location: 66-1491 bp Feature: domain Description: HsdM Location: 66-1491 bp Feature: gene Location: 1861-3336 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2209-2674 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2209-2674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2