myRT

myRT report for GCA_004153445.1_ASM415344v1

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Seq: SDQC01000001.1 (1241398 bp)
Overview 1 RT 1: 575646-581297 bp 2 RT 2: 1190950-1198519 bp Neighborhood of RT #1 [575646, 581395] HTH_31 HipA HipA_C RVT-UG5 nitrilase HEPN_AbiU2 Neighborhood of RT #2 [1190950, 1198519] TraI_TIGR TraI_TIGR TraI_TIGR TraI_TIGR RVT-Retrons AAA_21 Feature: gene Location: 575646-576011 bp Feature: domain Description: HTH_31 Location: 575700-575874 bp Feature: domain Description: HTH_31 Location: 575700-575874 bp Feature: gene Location: 576008-577252 bp Feature: domain Description: HipA Location: 576092-576191 bp Feature: domain Description: HipA Location: 576092-5761 91 bp Feature: domain Description: HipA_C Location: 576542-577166 bp Feature: domain Description: HipA_C Location: 576542-5771 66 bp Feature: gene Location: 577561-579516 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 578032-578512 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 578032-57851 2 bp Feature: gene Location: 579516-580448 bp Feature: domain Description: nitrilase Location: 579711-580353 bp Feature: domain Description: nitrilase Location: 57971 1 -580353 bp Feature: gene Location: 580805-581395 bp Feature: domain Description: HEPN_AbiU2 Location: 580856-581297 bp Feature: domain Description: HEPN_AbiU2 Location: 580856-581 297 bp Feature: gene Location: 1190950-1193847 bp Feature: domain Description: TraI_TIGR Location: 1190953-1192081 bp Feature: domain Description: TraI_TIGR Location: 1 1 90953-1 1 92081 bp Feature: domain Description: TraI_TIGR Location: 1192240-1192918 bp Feature: domain Description: TraI_TIGR Location: 1 1 92240-1 1 9291 8 bp Feature: domain Description: TraI_TIGR Location: 1192963-1193527 bp Feature: domain Description: TraI_TIGR Location: 1 1 92963-1 1 93527 bp Feature: domain Description: TraI_TIGR Location: 1193536-1193710 bp Feature: domain Description: TraI_TIGR Location: 1 1 93536-1 1 9371 0 bp Feature: gene Location: 1194174-1194371 bp Feature: gene Location: 1194704-1195705 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1194821-1195379 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 94821 -1 1 95379 bp Feature: gene Location: 1195819-1197261 bp Feature: domain Description: AAA_21 Location: 1196044-1196446 bp Feature: domain Description: AAA_21 Location: 1 1 96044-1 1 96446 bp Feature: gene Location: 1198202-1198519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_31 (pfam13560), HipA (COG3550), HipA_C (pfam07804), RVT-UG5, nitrilase (cl11424), HEPN_AbiU2 (pfam18734), TraI_TIGR (TIGR02760), RVT-Retrons, AAA_21 (pfam13304)

Seq: SDQC01000008.1 (95420 bp)
Overview 1 RT 1: 47850-50686 bp Neighborhood of RT #1 [47850, 50742] RVT-DGRs Avd_like Feature: gene Location: 47850-48380 bp Feature: gene Location: 48431-48928 bp Feature: gene Location: 48977-50098 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49163-49850 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49163-49850 bp Feature: gene Location: 49859-50311 bp Feature: gene Location: 50353-50742 bp Feature: domain Description: Avd_like Location: 50380-50686 bp Feature: domain Description: Avd_like Location: 50380-50686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)