myRT

myRT report for GCA_004167845.1_ASM416784v1

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Seq: RCXM01000111.1 (2632 bp)
Overview 1 RT 1: 134-2604 bp Neighborhood of RT #1 [134, 2630] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 134-409 bp Feature: gene Location: 375-1796 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 747-1452 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 747-1 452 bp Feature: gene Location: 1811-2191 bp Feature: domain Description: Avd_like Location: 1838-2144 bp Feature: domain Description: Avd_like Location: 1 838-21 44 bp Feature: gene Location: 2337-2630 bp Feature: domain Description: DUF1566 Location: 2358-2604 bp Feature: domain Description: DUF1 566 Location: 2358-2604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXM01000031.1 (70058 bp)
Overview 1 RT 1: 8357-13416 bp Neighborhood of RT #1 [8357, 13661] RVT-Retrons DNA_processg_A Feature: gene Location: 8357-8899 bp Feature: gene Location: 9215-10135 bp Feature: gene Location: 10137-11597 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10338-10968 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10338-10968 bp Feature: gene Location: 11911-12699 bp Feature: gene Location: 12735-13661 bp Feature: domain Description: DNA_processg_A Location: 12939-13416 bp Feature: domain Description: DNA_processg_A Location: 12 939-13416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXM01000020.1 (93181 bp)
Overview 1 RT 1: 49312-54081 bp Neighborhood of RT #1 [49312, 54110] INTN1_C_like RVT-GII Intron_maturas2 HNHc HTH_18 Feature: gene Location: 49312-49647 bp Feature: gene Location: 49810-50214 bp Feature: domain Description: INTN1_C_like Location: 49882-50191 bp Feature: domain Description: INTN1_C_like Location: 49882-50191 bp Feature: gene Location: 50629-52140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50671-51415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50671-51415 bp Feature: domain Description: Intron_maturas2 Location: 51496-51793 bp Feature: domain Description: Intron_maturas2 Location: 51496-51793 bp Feature: domain Description: HNHc Note: nucleases Location: 51967-52072 bp Feature: domain Description: HNHc Note: nucleases Location: 51967-52072 bp Feature: gene Location: 52700-52957 bp Feature: gene Location: 52971-54110 bp Feature: domain Description: HTH_18 Location: 53841-54081 bp Feature: domain Description: HTH_18 Location: 53 841-54081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXM01000002.1 (205267 bp)
Overview 1 RT 1: 62355-72574 bp Neighborhood of RT #1 [62355, 72585] DUF1566 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 62355-64184 bp Feature: gene Location: 64247-64600 bp Feature: gene Location: 64591-66012 bp Feature: domain Description: DUF1566 Location: 64663-64807 bp Feature: domain Description: DUF1566 Location: 64 663-64 807 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64996-65737 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64 996-65737 bp Feature: gene Location: 66025-66426 bp Feature: domain Description: Avd_like Location: 66064-66403 bp Feature: domain Description: Avd_like Location: 66064 -664 03 bp Feature: gene Location: 66556-72585 bp Feature: domain Description: DUF1566 Location: 72268-72574 bp Feature: domain Description: DUF1566 Location: 72268-72574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXM01000027.1 (82145 bp)
Overview 1 RT 1: 8441-11669 bp Neighborhood of RT #1 [8441, 11761] Virulence_RhuM RVT-Retrons HTH_17 Feature: gene Location: 8441-8656 bp Feature: domain Description: Virulence_RhuM Location: 8483-8588 bp Feature: domain Description: Virulence_RhuM Location: 8483-85 88 bp Feature: gene Location: 8921-9802 bp Feature: gene Location: 9833-10690 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9995-10520 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9995 -105 20 bp Feature: gene Location: 10715-10930 bp Feature: gene Location: 11396-11761 bp Feature: domain Description: HTH_17 Location: 11531-11669 bp Feature: domain Description: HTH_17 Location: 115 31-11669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXM01000029.1 (77680 bp)
Overview 1 RT 1: 58988-71804 bp Neighborhood of RT #1 [58988, 71804] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 KOG1803 MTES_1575 DUF3320 RVT-Retrons Feature: gene Location: 58988-60784 bp Feature: domain Description: rpsA Location: 59057-60668 bp Feature: domain Description: rpsA Location: 59057-6 06 6 8 bp Feature: gene Location: 60953-66826 bp Feature: domain Description: DUF4011 Location: 62117-62627 bp Feature: domain Description: DUF4011 Location: 6 2117-6 26 27 bp Feature: domain Description: DEXXQc_SF1 Location: 62966-63575 bp Feature: domain Description: DEXXQc_SF1 Location: 6 296 6 -6 3575 bp Feature: domain Description: DEXXQc_SF1 Location: 64238-65153 bp Feature: domain Description: DEXXQc_SF1 Location: 6 4238-6 5153 bp Feature: domain Description: KOG1803 Location: 65288-65666 bp Feature: domain Description: KOG1803 Location: 6 5288-6 56 6 6 bp Feature: domain Description: MTES_1575 Location: 65825-66113 bp Feature: domain Description: MTES_1575 Location: 6 5825-6 6 113 bp Feature: domain Description: DUF3320 Location: 66344-66464 bp Feature: domain Description: DUF3320 Location: 6 6 344-6 6 46 4 bp Feature: gene Location: 66868-68001 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 67192-67738 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6 7192-6 7738 bp Feature: gene Location: 68206-70392 bp Feature: gene Location: 71295-71804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT