myRT

myRT report for GCA_004168145.1_ASM416814v1

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Seq: RCXC01000004.1 (254342 bp)
Overview 1 RT 1: 140879-144729 bp Neighborhood of RT #1 [140879, 144878] Avd_like RVT-DGRs Phage_holin_4_1 Feature: gene Location: 140879-142225 bp Feature: gene Location: 142297-142692 bp Feature: domain Description: Avd_like Location: 142318-142630 bp Feature: domain Description: Avd_like Location: 1 4231 8-1 42630 bp Feature: gene Location: 142743-144140 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 143070-143766 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 43070-1 43766 bp Feature: gene Location: 144118-144378 bp Feature: gene Location: 144402-144878 bp Feature: domain Description: Phage_holin_4_1 Location: 144474-144729 bp Feature: domain Description: Phage_holin_4_1 Location: 1 44474-1 44729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXC01000062.1 (3139 bp)
Overview 1 RT 1: 3-3136 bp Neighborhood of RT #1 [3, 3136] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3-185 bp Feature: gene Location: 233-514 bp Feature: gene Location: 501-2309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-1587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-1587 bp Feature: domain Description: Intron_maturas2 Location: 1683-1962 bp Feature: domain Description: Intron_maturas2 Location: 1683-1962 bp Feature: domain Description: HNHc Note: nucleases Location: 2139-2286 bp Feature: domain Description: HNHc Note: nucleases Location: 2 139-2 2 86 bp Feature: gene Location: 2591-2737 bp Feature: gene Location: 2837-3136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXC01000001.1 (391594 bp)
Overview 1 RT 1: 350633-355590 bp Neighborhood of RT #1 [350633, 357134] RVT-DGRs Prophage_tail Prophage_tail Feature: gene Location: 350633-352060 bp Feature: gene Location: 352111-352458 bp Feature: gene Location: 352736-353773 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 352946-353552 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 52946-3 53 552 bp Feature: gene Location: 353970-354158 bp Feature: gene Location: 354168-357134 bp Feature: domain Description: Prophage_tail Location: 354522-354723 bp Feature: domain Description: Prophage_tail Location: 3 54522-3 54723 bp Feature: domain Description: Prophage_tail Location: 355344-355590 bp Feature: domain Description: Prophage_tail Location: 3 553 44-3 55590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXC01000008.1 (187029 bp)
Overview 1 RT 1: 96229-104633 bp Neighborhood of RT #1 [96229, 105328] KAP_NTPase TraG-D_C RVT_N RVT-GII GIIM YWFCY Relaxase Feature: gene Location: 96229-99483 bp Feature: domain Description: KAP_NTPase Location: 96367-97345 bp Feature: domain Description: KAP_NTPase Location: 96367-9734 5 bp Feature: gene Location: 99615-100913 bp Feature: domain Description: TraG-D_C Location: 100281-100611 bp Feature: domain Description: TraG-D_C Location: 100281-100611 bp Feature: gene Location: 100834-102486 bp Feature: domain Description: RVT_N Location: 100888-101131 bp Feature: domain Description: RVT_N Location: 100888-101131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101176-101824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101176-101824 bp Feature: domain Description: GIIM Note: maturase Location: 101878-102109 bp Feature: domain Description: GIIM Note: maturase Location: 101878-102109 bp Feature: gene Location: 103124-104050 bp Feature: domain Description: YWFCY Location: 103133-103310 bp Feature: domain Description: YWFCY Location: 103133-103310 bp Feature: gene Location: 104081-105328 bp Feature: domain Description: Relaxase Location: 104273-104633 bp Feature: domain Description: Relaxase Location: 104 273-104 633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXC01000033.1 (20245 bp)
Overview 1 RT 1: 11285-20242 bp Neighborhood of RT #1 [11285, 20242] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 RVT-GII Intron_maturas2 HNHc DUF4134 Feature: gene Location: 11285-11644 bp Feature: gene Location: 11656-13359 bp Feature: domain Description: Bac_Flav_CT_G Location: 11776-13336 bp Feature: domain Description: Bac_Flav_CT_G Location: 11776-13336 bp Feature: gene Location: 13356-15017 bp Feature: domain Description: RVT_N Location: 13410-13653 bp Feature: domain Description: RVT_N Location: 13410-1365 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13698-14346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13698-14346 bp Feature: domain Description: GIIM Note: maturase Location: 14400-14631 bp Feature: domain Description: GIIM Note: maturase Location: 14400-14631 bp Feature: gene Location: 15099-15479 bp Feature: gene Location: 15601-16545 bp Feature: domain Description: Bac_Flav_CT_G Location: 15604-16531 bp Feature: domain Description: Bac_Flav_CT_G Location: 15 604-165 31 bp Feature: gene Location: 16550-17032 bp Feature: domain Description: DUF4133 Location: 16754-16982 bp Feature: domain Description: DUF4133 Location: 1675 4-16982 bp Feature: gene Location: 16942-18759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17206-18028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17206-18028 bp Feature: domain Description: Intron_maturas2 Location: 18103-18430 bp Feature: domain Description: Intron_maturas2 Location: 18103-18430 bp Feature: domain Description: HNHc Note: nucleases Location: 18583-18733 bp Feature: domain Description: HNHc Note: nucleases Location: 185 83-18733 bp Feature: gene Location: 19377-19673 bp Feature: domain Description: DUF4134 Location: 19395-19668 bp Feature: domain Description: DUF4134 Location: 19395 -19668 bp Feature: gene Location: 19817-20242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXC01000019.1 (59211 bp)
Overview 1 RT 1: 7356-11253 bp Neighborhood of RT #1 [7356, 11253] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 7356-7847 bp Feature: domain Description: Phage_holin_4_1 Location: 7407-7701 bp Feature: domain Description: Phage_holin_4_1 Location: 7407-7701 bp Feature: gene Location: 7851-8258 bp Feature: gene Location: 8236-9246 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8446-9034 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8446 -9034 bp Feature: gene Location: 9492-9857 bp Feature: gene Location: 9934-11253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT