myRT

myRT report for GCA_004168485.1_ASM416848v1

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Seq: RCXL01000017.1 (94764 bp)
Overview 1 RT 1: 29284-32104 bp Neighborhood of RT #1 [29284, 32104] RVT-DGRs Feature: gene Location: 29284-29526 bp Feature: gene Location: 29712-30161 bp Feature: gene Location: 30194-31495 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30407-31001 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30407-31 001 bp Feature: gene Location: 31592-31849 bp Feature: gene Location: 31871-32104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXL01000076.1 (2420 bp)
Overview 1 RT 1: 347-1922 bp Neighborhood of RT #1 [347, 2299] RVT_N RVT-GII GIIM Feature: gene Location: 347-481 bp Feature: gene Location: 647-2299 bp Feature: domain Description: RVT_N Location: 701-944 bp Feature: domain Description: RVT_N Location: 701-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989-1637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989-1637 bp Feature: domain Description: GIIM Note: maturase Location: 1691-1922 bp Feature: domain Description: GIIM Note: maturase Location: 1691-192 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXL01000059.1 (7230 bp)
Overview 1 RT 1: 2292-6939 bp Neighborhood of RT #1 [2292, 7010] RVT-DGRs Dam Feature: gene Location: 2292-3728 bp Feature: gene Location: 3909-4217 bp Feature: gene Location: 4216-5538 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4426-5017 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4426-5017 bp Feature: gene Location: 5571-5981 bp Feature: gene Location: 6168-7010 bp Feature: domain Description: Dam Location: 6171-6939 bp Feature: domain Description: Dam Location: 6171-693 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXL01000046.1 (22525 bp)
Overview 1 RT 1: 13427-22522 bp Neighborhood of RT #1 [13427, 22524] COG4646 Helicase_C matK RVT-GII Intron_maturas2 N6_Mtase N6_Mtase COG4646 DUF1896 Feature: gene Location: 13427-13567 bp Feature: gene Location: 13772-16537 bp Feature: domain Description: COG4646 Location: 13886-15026 bp Feature: domain Description: COG4 64 6 Location: 13886-15026 bp Feature: domain Description: Helicase_C Location: 15239-15437 bp Feature: domain Description: Helicase_C Location: 15239-154 37 bp Feature: gene Location: 16524-18326 bp Feature: domain Description: matK Location: 16593-16680 bp Feature: domain Description: matK Location: 16593-16680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16788-17610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16788-17610 bp Feature: domain Description: Intron_maturas2 Location: 17760-17994 bp Feature: domain Description: Intron_maturas2 Location: 17760-17994 bp Feature: gene Location: 18879-22070 bp Feature: domain Description: N6_Mtase Location: 19191-19299 bp Feature: domain Description: N6_Mtase Location: 19191-19299 bp Feature: domain Description: N6_Mtase Location: 19437-19794 bp Feature: domain Description: N6_Mtase Location: 194 37-19794 bp Feature: domain Description: COG4646 Location: 21123-22059 bp Feature: domain Description: COG4 64 6 Location: 21123-22059 bp Feature: gene Location: 22060-22524 bp Feature: domain Description: DUF1896 Location: 22102-22522 bp Feature: domain Description: DUF1896 Location: 22102-22522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXL01000005.1 (201356 bp)
Overview 1 RT 1: 31082-36274 bp Neighborhood of RT #1 [31082, 36285] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Feature: gene Location: 31082-32020 bp Feature: domain Description: Bac_Flav_CT_G Location: 31085-32006 bp Feature: domain Description: Bac_Flav_CT_G Location: 31085 -32006 bp Feature: gene Location: 32199-32348 bp Feature: gene Location: 32604-34265 bp Feature: domain Description: RVT_N Location: 32658-32901 bp Feature: domain Description: RVT_N Location: 3265 8-32901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32946-33594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32946-335 94 bp Feature: domain Description: GIIM Note: maturase Location: 33648-33879 bp Feature: domain Description: GIIM Note: maturase Location: 33648-33879 bp Feature: gene Location: 34262-35956 bp Feature: domain Description: Bac_Flav_CT_G Location: 34382-35948 bp Feature: domain Description: Bac_Flav_CT_G Location: 34382-35 948 bp Feature: gene Location: 35971-36285 bp Feature: domain Description: DUF3876 Location: 36025-36274 bp Feature: domain Description: DUF3876 Location: 36025 -36274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXL01000012.1 (109793 bp)
Overview 1 RT 1: 89348-98778 bp Neighborhood of RT #1 [89348, 98778] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 89348-96067 bp Feature: domain Description: Laminin_G_3 Location: 90791-90869 bp Feature: domain Description: Laminin_G_3 Location: 90791-9086 9 bp Feature: domain Description: Laminin_G_3 Location: 91520-91946 bp Feature: domain Description: Laminin_G_3 Location: 91520-91946 bp Feature: gene Location: 96312-96467 bp Feature: gene Location: 96505-97875 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 96787-97378 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 96 787-97378 bp Feature: gene Location: 97872-98357 bp Feature: gene Location: 98536-98778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXL01000003.1 (241476 bp)
Overview 1 RT 1: 77542-82453 bp Neighborhood of RT #1 [77542, 84615] RVT-DGRs Prophage_tail Prophage_tail Feature: gene Location: 77542-78879 bp Feature: gene Location: 78901-79125 bp Feature: gene Location: 79313-80485 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 79532-80120 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7 9532-80120 bp Feature: gene Location: 80597-81004 bp Feature: gene Location: 81010-84615 bp Feature: domain Description: Prophage_tail Location: 81286-81565 bp Feature: domain Description: Prophage_tail Location: 81286-81565 bp Feature: domain Description: Prophage_tail Location: 82210-82453 bp Feature: domain Description: Prophage_tail Location: 82210-82453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXL01000002.1 (266786 bp)
Overview 1 RT 1: 120754-122784 bp Neighborhood of RT #1 [120754, 122784] RVT-DGRs Feature: gene Location: 120754-120957 bp Feature: gene Location: 120997-121179 bp Feature: gene Location: 121241-122056 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 121574-121901 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 121574-121901 bp Feature: gene Location: 122022-122252 bp Feature: gene Location: 122200-122784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RCXL01000072.1 (2651 bp)
Overview 1 RT 1: 291-2120 bp Neighborhood of RT #1 [291, 2461] RVT-GII Intron_maturas2 Feature: gene Location: 291-419 bp Feature: gene Location: 653-2461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 917-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 17-1739 bp Feature: domain Description: Intron_maturas2 Location: 1865-2120 bp Feature: domain Description: Intron_maturas2 Location: 1865-2120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT