myRT

myRT report for GCA_004169485.1_ASM416948v1

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Seq: RBFJ01000010.1 (84475 bp)
Overview 1 RT 1: 79388-84460 bp Neighborhood of RT #1 [79388, 84474] WGR_MMR_like DUF772 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 79388-79855 bp Feature: domain Description: WGR_MMR_like Location: 79472-79661 bp Feature: domain Description: WGR_MMR_like Location: 79472-79661 bp Feature: gene Location: 80193-81653 bp Feature: domain Description: DUF772 Location: 80376-80568 bp Feature: domain Description: DUF772 Location: 80376-80568 bp Feature: gene Location: 81672-82871 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81891-82587 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81 891 -82587 bp Feature: gene Location: 83203-83556 bp Feature: domain Description: Avd_like Location: 83230-83536 bp Feature: domain Description: Avd_like Location: 83230-83536 bp Feature: gene Location: 83635-84474 bp Feature: domain Description: DUF1566 Location: 84244-84460 bp Feature: domain Description: DUF1 566 Location: 84244-84460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_MMR_like (cd07996), DUF772 (pfam05598), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: RBFJ01000036.1 (36911 bp)
Overview 1 RT 1: 1155-6088 bp Neighborhood of RT #1 [1155, 6102] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 1155-1529 bp Feature: domain Description: Tra_M Location: 1203-1398 bp Feature: domain Description: Tra_M Location: 12 03-1398 bp Feature: gene Location: 1989-2141 bp Feature: gene Location: 2377-3897 bp Feature: domain Description: RVT_N Location: 2434-2677 bp Feature: domain Description: RVT_N Location: 2 434-2 677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2722-3346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 2 -3346 bp Feature: domain Description: GIIM Note: maturase Location: 3397-3631 bp Feature: domain Description: GIIM Note: maturase Location: 3397-3631 bp Feature: gene Location: 3968-5419 bp Feature: domain Description: Tnp_DNA_bind Location: 4007-4175 bp Feature: domain Description: Tnp_DNA_bind Location: 4007-4175 bp Feature: domain Description: DDE_Tnp_1 Location: 4832-5126 bp Feature: domain Description: DDE_Tnp_1 Location: 4832 -512 6 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 5132-5411 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 5132 -5411 bp Feature: gene Location: 5725-6102 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 5752-6088 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 5752 -6088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: RBFJ01000050.1 (23909 bp)
Overview 1 RT 1: 1-2887 bp Neighborhood of RT #1 [1, 2887] RVT-UG5 DUF5338 Feature: gene Location: 1-1617 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 511-1039 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 511-103 9 bp Feature: gene Location: 1922-2287 bp Feature: domain Description: DUF5338 Location: 1931-2138 bp Feature: domain Description: DUF53 3 8 Location: 193 1-213 8 bp Feature: gene Location: 2615-2887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, DUF5338 (pfam17273)