myRT

myRT report for GCA_004169535.1_ASM416953v1

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Seq: RBFN01000020.1 (63087 bp)
Overview 1 RT 1: 54-2665 bp Neighborhood of RT #1 [54, 2796] RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 54-1574 bp Feature: domain Description: RVT_N Location: 111-354 bp Feature: domain Description: RVT_N Location: 1 1 1 -354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1 023 bp Feature: domain Description: GIIM Note: maturase Location: 1074-1308 bp Feature: domain Description: GIIM Note: maturase Location: 1 074-1 308 bp Feature: gene Location: 1810-1962 bp Feature: gene Location: 2422-2796 bp Feature: domain Description: Tra_M Location: 2470-2665 bp Feature: domain Description: Tra_M Location: 2470-2665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261)

Seq: RBFN01000058.1 (11755 bp)
Overview 1 RT 1: 8848-11156 bp Neighborhood of RT #1 [8848, 11752] DUF5338 RVT-UG5 Feature: gene Location: 8848-9120 bp Feature: gene Location: 9448-9813 bp Feature: domain Description: DUF5338 Location: 9457-9664 bp Feature: domain Description: DUF5338 Location: 9457-9664 bp Feature: gene Location: 10118-11752 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 10628-11156 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1062 8-11156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5

Seq: RBFN01000012.1 (84497 bp)
Overview 1 RT 1: 79388-84481 bp Neighborhood of RT #1 [79388, 84495] WGR_MMR_like DUF772 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 79388-79855 bp Feature: domain Description: WGR_MMR_like Location: 79472-79661 bp Feature: domain Description: WGR_MMR_like Location: 79472-79661 bp Feature: gene Location: 80193-81653 bp Feature: domain Description: DUF772 Location: 80376-80568 bp Feature: domain Description: DUF772 Location: 803 76-80568 bp Feature: gene Location: 81672-82871 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81891-82587 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81891-82587 bp Feature: gene Location: 83203-83556 bp Feature: domain Description: Avd_like Location: 83230-83536 bp Feature: domain Description: Avd_like Location: 83 23 0-83 53 6 bp Feature: gene Location: 83635-84495 bp Feature: domain Description: DUF1566 Location: 84265-84481 bp Feature: domain Description: DUF1566 Location: 84265-84481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_MMR_like (cd07996), DUF772 (pfam05598), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)