myRT

myRT report for GCA_004169585.1_ASM416958v1

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Seq: RBFT01000015.1 (84475 bp)
Overview 1 RT 1: 2-4559 bp Neighborhood of RT #1 [2, 4559] DUF1566 Avd_like RVT-DGRs DUF772 Feature: gene Location: 2-841 bp Feature: domain Description: DUF1566 Location: 611-827 bp Feature: domain Description: DUF1 566 Location: 61 1 -827 bp Feature: gene Location: 920-1273 bp Feature: domain Description: Avd_like Location: 947-1253 bp Feature: domain Description: Avd_like Location: 947-1 253 bp Feature: gene Location: 1605-2804 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1824-2520 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 824-2520 bp Feature: gene Location: 2823-4283 bp Feature: domain Description: DUF772 Location: 3006-3198 bp Feature: domain Description: DUF772 Location: 3006-31 98 bp Feature: gene Location: 4428-4559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, DUF772 (pfam05598)

Seq: RBFT01000016.1 (80562 bp)
Overview 1 RT 1: 53546-59540 bp Neighborhood of RT #1 [53546, 59540] Arm-DNA-bind_3 INT_P4_C RVT-UG5 DUF5338 Feature: gene Location: 53546-54808 bp Feature: domain Description: Arm-DNA-bind_3 Location: 53597-53849 bp Feature: domain Description: Arm-DNA-bind_3 Location: 53597-53849 bp Feature: domain Description: INT_P4_C Location: 54203-54734 bp Feature: domain Description: INT_P4_C Location: 542 03-54734 bp Feature: gene Location: 54914-55084 bp Feature: gene Location: 55181-58270 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 55691-56219 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 55691-562 19 bp Feature: gene Location: 58575-58940 bp Feature: domain Description: DUF5338 Location: 58584-58791 bp Feature: domain Description: DUF5338 Location: 58584-58791 bp Feature: gene Location: 59268-59540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-UG5, DUF5338 (pfam17273)

Seq: RBFT01000025.1 (63097 bp)
Overview 1 RT 1: 54-2665 bp Neighborhood of RT #1 [54, 2796] RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 54-1574 bp Feature: domain Description: RVT_N Location: 111-354 bp Feature: domain Description: RVT_N Location: 111-3 54 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 99-1023 bp Feature: domain Description: GIIM Note: maturase Location: 1074-1308 bp Feature: domain Description: GIIM Note: maturase Location: 1074-13 08 bp Feature: gene Location: 1810-1962 bp Feature: gene Location: 2422-2796 bp Feature: domain Description: Tra_M Location: 2470-2665 bp Feature: domain Description: Tra_M Location: 2470-2665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261)