myRT

myRT report for GCA_004169595.1_ASM416959v1

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Seq: RBFP01000021.1 (63076 bp)
Overview 1 RT 1: 54-2665 bp Neighborhood of RT #1 [54, 2796] RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 54-1574 bp Feature: domain Description: RVT_N Location: 111-354 bp Feature: domain Description: RVT_N Location: 1 1 1 -354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1 023 bp Feature: domain Description: GIIM Note: maturase Location: 1074-1308 bp Feature: domain Description: GIIM Note: maturase Location: 1 074-1 308 bp Feature: gene Location: 1810-1962 bp Feature: gene Location: 2422-2796 bp Feature: domain Description: Tra_M Location: 2470-2665 bp Feature: domain Description: Tra_M Location: 2470-2665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261)

Seq: RBFP01000045.1 (23984 bp)
Overview 1 RT 1: 1-2962 bp Neighborhood of RT #1 [1, 2962] RVT-UG5 DUF5338 Feature: gene Location: 1-1692 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 511-1039 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 511-1039 bp Feature: gene Location: 1997-2362 bp Feature: domain Description: DUF5338 Location: 2006-2213 bp Feature: domain Description: DUF5338 Location: 2 006-2 2 13 bp Feature: gene Location: 2690-2962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, DUF5338 (pfam17273)

Seq: RBFP01000014.1 (84475 bp)
Overview 1 RT 1: 2-4559 bp Neighborhood of RT #1 [2, 4559] DUF1566 Avd_like RVT-DGRs DUF772 Feature: gene Location: 2-841 bp Feature: domain Description: DUF1566 Location: 611-827 bp Feature: domain Description: DUF1566 Location: 611-827 bp Feature: gene Location: 920-1273 bp Feature: domain Description: Avd_like Location: 947-1253 bp Feature: domain Description: Avd_like Location: 947-1253 bp Feature: gene Location: 1605-2804 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1824-2520 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1824-2520 bp Feature: gene Location: 2823-4283 bp Feature: domain Description: DUF772 Location: 3006-3198 bp Feature: domain Description: DUF772 Location: 3 006-3 198 bp Feature: gene Location: 4428-4559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, DUF772 (pfam05598)