myRT

myRT report for GCA_004170875.1_ASM417087v1

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Seq: SAFI01000059.1 (21001 bp)
Overview 1 RT 1: 9418-13288 bp Neighborhood of RT #1 [9418, 13288] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 9418-9744 bp Feature: domain Description: InsE Location: 9421-9742 bp Feature: domain Description: InsE Location: 9421 -9742 bp Feature: gene Location: 9744-10223 bp Feature: domain Description: PHA02517 Location: 9804-10158 bp Feature: domain Description: PHA0251 7 Location: 9804-1 01 58 bp Feature: gene Location: 10815-12338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11088-11820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 088-1 1 820 bp Feature: domain Description: GIIM Note: maturase Location: 11895-12093 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 895-1 2093 bp Feature: gene Location: 12503-12907 bp Feature: domain Description: PHA02517 Location: 12506-12896 bp Feature: domain Description: PHA0251 7 Location: 1 2506-1 2896 bp Feature: gene Location: 13082-13288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: SAFI01000028.1 (53403 bp)
Overview 1 RT 1: 45412-53315 bp Neighborhood of RT #1 [45412, 53315] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG8 Feature: gene Location: 45412-47994 bp Feature: domain Description: mutS1 Location: 45463-47983 bp Feature: domain Description: mutS1 Location: 45463-47983 bp Feature: gene Location: 48139-49599 bp Feature: domain Description: INT_Rci_Hp1_C Location: 48514-48721 bp Feature: domain Description: INT_Rci_Hp1_C Location: 48514-4872 1 bp Feature: domain Description: INT_P4_C Location: 48940-49477 bp Feature: domain Description: INT_P4_C Location: 48940-49477 bp Feature: gene Location: 50855-52873 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 51425-51875 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5142 5-51875 bp Feature: gene Location: 53112-53315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG8