myRT

myRT report for GCA_004172045.1_ASM417204v1

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Seq: SAID01000009.1 (162247 bp)
Overview 1 RT 1: 57056-63064 bp Neighborhood of RT #1 [57056, 63081] proA PRK09692 RVT-UG7 Psu Feature: gene Location: 57056-58309 bp Feature: domain Description: proA Location: 57083-58274 bp Feature: domain Description: proA Location: 57083-58274 bp Feature: gene Location: 58664-59848 bp Feature: domain Description: PRK09692 Location: 58670-59825 bp Feature: domain Description: PRK09692 Location: 58670-59825 bp Feature: gene Location: 59841-61469 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 60249-60678 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 60249-60678 bp Feature: gene Location: 61466-62206 bp Feature: gene Location: 62509-63081 bp Feature: domain Description: Psu Location: 62527-63064 bp Feature: domain Description: Psu Location: 62527-63064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: SAID01000064.1 (6187 bp)
Overview 1 RT 1: 1203-6118 bp Neighborhood of RT #1 [1203, 6118] StbA RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 1203-2210 bp Feature: domain Description: StbA Location: 1257-2205 bp Feature: domain Description: StbA Location: 12 57-2 2 05 bp Feature: gene Location: 2944-3084 bp Feature: gene Location: 3106-4830 bp Feature: domain Description: RVT_N Location: 3163-3400 bp Feature: domain Description: RVT_N Location: 3163-3400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3451-4099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3451-4099 bp Feature: domain Description: YkfC Location: 4231-4387 bp Feature: domain Description: YkfC Location: 42 31-4387 bp Feature: domain Description: HNHc Note: nucleases Location: 4615-4774 bp Feature: domain Description: HNHc Note: nucleases Location: 4615-4774 bp Feature: gene Location: 4907-5809 bp Feature: domain Description: DUF1281 Location: 4976-5504 bp Feature: domain Description: DUF12 81 Location: 4976-5504 bp Feature: domain Description: DUF1281_C Location: 5510-5738 bp Feature: domain Description: DUF12 81_C Location: 5510-5738 bp Feature: gene Location: 5813-6118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)