myRT

myRT report for GCA_004172355.1_ASM417235v1

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Seq: SAGL01000034.1 (46255 bp)
Overview 1 RT 1: 384-4400 bp Neighborhood of RT #1 [384, 4423] InsE PHA02517 RVT-GII GIIM PHA02517 DDE_Tnp_IS66_C Feature: gene Location: 384-710 bp Feature: domain Description: InsE Location: 387-708 bp Feature: domain Description: InsE Location: 387-708 bp Feature: gene Location: 710-1189 bp Feature: domain Description: PHA02517 Location: 770-1124 bp Feature: domain Description: PHA0251 7 Location: 770-1 1 24 bp Feature: gene Location: 1781-3304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2054-2786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2054-2786 bp Feature: domain Description: GIIM Note: maturase Location: 2861-3059 bp Feature: domain Description: GIIM Note: maturase Location: 2861 -3059 bp Feature: gene Location: 3469-3873 bp Feature: domain Description: PHA02517 Location: 3472-3862 bp Feature: domain Description: PHA0251 7 Location: 3472-3862 bp Feature: gene Location: 4238-4423 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4289-4400 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4289-4400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)

Seq: SAGL01000070.1 (18820 bp)
Overview 1 RT 1: 13334-18262 bp Neighborhood of RT #1 [13334, 18726] proA PRK09692 RVT-UG3 RVT-UG8 Feature: gene Location: 13334-14587 bp Feature: domain Description: proA Location: 13361-14552 bp Feature: domain Description: proA Location: 13361-14552 bp Feature: gene Location: 14940-16118 bp Feature: domain Description: PRK09692 Location: 14946-16101 bp Feature: domain Description: PRK09692 Location: 14946-16101 bp Feature: gene Location: 16303-17316 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 16405-16867 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 16405-16867 bp Feature: gene Location: 17320-18726 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 17815-18262 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 17815-182 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG3, RVT-UG8