myRT

myRT report for GCA_004174565.1_ASM417456v1

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Seq: SEDY01000218.1 Proteobacteria bacterium isolate PMG_185 scaffold_96121, whole genome shotgun sequence (2603 bp)
Overview 1 RT 1: 1-2597 bp Neighborhood of RT #1 [1, 2602] RVT-UG8 PRK05433 Feature: gene Location: 1-252 bp Feature: gene Location: 245-817 bp Feature: gene Location: 937-2211 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 940-1213 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 940-1 21 3 bp Feature: gene Location: 2396-2602 bp Feature: domain Description: PRK05433 Location: 2399-2597 bp Feature: domain Description: PRK05433 Location: 2399-2597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, PRK05433 (GTP-binding protein LepA; Provisional)

Seq: SEDY01001668.1 Proteobacteria bacterium isolate PMG_185 scaffold_319585, whole genome shotgun sequence (1128 bp)
Overview 1 RT 1: 2-1003 bp Neighborhood of RT #1 [2, 1125] queA RVT-CRISPR-like Feature: gene Location: 2-322 bp Feature: gene Location: 155-604 bp Feature: domain Description: queA Location: 329-494 bp Feature: domain Description: queA Location: 32 9-494 bp Feature: gene Location: 778-1125 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 868-1003 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 868-1003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT queA (TIGR00113), RVT-CRISPR

Seq: SEDY01000029.1 Proteobacteria bacterium isolate PMG_185 scaffold_33355, whole genome shotgun sequence (5334 bp)
Overview 1 RT 1: 3-4847 bp Neighborhood of RT #1 [3, 4847] RVT-UG8 RVT-UG3 Feature: gene Location: 3-290 bp Feature: gene Location: 427-777 bp Feature: gene Location: 836-2665 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1244-1694 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1244-1694 bp Feature: gene Location: 2757-4115 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3147-3612 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3 147-3 612 bp Feature: gene Location: 4254-4475 bp Feature: gene Location: 4608-4847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3

Seq: SEDY01000067.1 Proteobacteria bacterium isolate PMG_185 scaffold_53277, whole genome shotgun sequence (3894 bp)
Overview 1 RT 1: 5-3877 bp Neighborhood of RT #1 [5, 3877] nitrilase RVT-UG5 Feature: gene Location: 5-358 bp Feature: gene Location: 480-1430 bp Feature: domain Description: nitrilase Location: 699-1314 bp Feature: domain Description: nitrilase Location: 699-1314 bp Feature: gene Location: 1437-3398 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1908-2424 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1908-24 24 bp Feature: gene Location: 3417-3680 bp Feature: gene Location: 3722-3877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nitrilase (cl11424), RVT-UG5

Seq: SEDY01000002.1 Proteobacteria bacterium isolate PMG_185 scaffold_13241, whole genome shotgun sequence (9619 bp)
Overview 1 RT 1: 5918-8829 bp Neighborhood of RT #1 [5918, 8829] Resolvase Recombinase RVT-Retrons Feature: gene Location: 5918-6601 bp Feature: domain Description: Resolvase Location: 5939-6344 bp Feature: domain Description: Resolvase Location: 5 939-6344 bp Feature: domain Description: Recombinase Location: 6482-6590 bp Feature: domain Description: Recombinase Location: 6482-65 90 bp Feature: gene Location: 6784-7086 bp Feature: gene Location: 7187-8230 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7379-7952 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7379-795 2 bp Feature: gene Location: 8430-8567 bp Feature: gene Location: 8683-8829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), RVT-Retrons

Seq: SEDY01001653.1 Proteobacteria bacterium isolate PMG_185 scaffold_317151, whole genome shotgun sequence (1134 bp)
Overview 1 RT 1: 3-1133 bp Neighborhood of RT #1 [3, 1133] RVT-Retrons Feature: gene Location: 3-806 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150-780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150-780 bp Feature: gene Location: 897-1133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SEDY01000033.1 Proteobacteria bacterium isolate PMG_185 scaffold_36981, whole genome shotgun sequence (4977 bp)
Overview 1 RT 1: 2129-4344 bp Neighborhood of RT #1 [2129, 4916] AAA_21 RVT-UG28 Feature: gene Location: 2129-3103 bp Feature: domain Description: AAA_21 Location: 2186-2399 bp Feature: domain Description: AAA_21 Location: 2186-2399 bp Feature: gene Location: 3103-3267 bp Feature: gene Location: 3426-4916 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 3711-4344 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 37 11-4344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-UG28

Seq: SEDY01000470.1 Proteobacteria bacterium isolate PMG_185 scaffold_142568, whole genome shotgun sequence (1986 bp)
Overview 1 RT 1: 29-1201 bp Neighborhood of RT #1 [29, 1914] RVT-UNC Feature: gene Location: 29-199 bp Feature: gene Location: 254-427 bp Feature: gene Location: 544-1914 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 772-1201 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 772-1201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17/RVT-CRISPR/RVT-UG19/RVT-DGRs(RVT-UNC)