myRT

myRT report for GCA_004193205.1_ASM419320v1

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Seq: RZUM01000005.1 (490290 bp)
Overview 1 RT 1: 273633-279715 bp Neighborhood of RT #1 [273633, 280104] PRK04311 selD RVT-GII GIIM HNHc NrfD Feature: gene Location: 273633-274949 bp Feature: domain Description: PRK04311 Location: 273651-274929 bp Feature: domain Description: PRK0431 1 Location: 273651 -274929 bp Feature: gene Location: 274796-276136 bp Feature: domain Description: selD Location: 275171-276071 bp Feature: domain Description: selD Location: 2751 71 -276071 bp Feature: gene Location: 277001-278251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277217-277877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27721 7-277877 bp Feature: domain Description: GIIM Note: maturase Location: 277955-278174 bp Feature: domain Description: GIIM Note: maturase Location: 277955-2781 74 bp Feature: gene Location: 278336-278665 bp Feature: domain Description: HNHc Note: nucleases Location: 278414-278570 bp Feature: domain Description: HNHc Note: nucleases Location: 27841 4-278570 bp Feature: gene Location: 279079-280104 bp Feature: domain Description: NrfD Location: 279193-279715 bp Feature: domain Description: NrfD Location: 2791 93-27971 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04311 (selenocysteine synthase; Provisional), selD (TIGR00476), RVT-GII, GIIM (pfam08388), HNHc (smart00507), NrfD (pfam03916)

Seq: RZUM01000012.1 (151335 bp)
Overview 1 RT 1: 9743-14750 bp Neighborhood of RT #1 [9743, 16819] BRCT_DNA_ligase_like RVT-UG22 COG5635 Feature: gene Location: 9743-10006 bp Feature: gene Location: 10089-11492 bp Feature: domain Description: BRCT_DNA_ligase_like Location: 10980-11199 bp Feature: domain Description: BRCT_DNA_ligase_like Location: 10980-11199 bp Feature: gene Location: 11485-12879 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 11527-11944 bp Feature: RT Description: RVT-UG2 2 Note: UG2 2 RT Location: 1152 7-11944 bp Feature: gene Location: 13778-13972 bp Feature: gene Location: 13070-16819 bp Feature: domain Description: COG5635 Location: 13973-14750 bp Feature: domain Description: COG5635 Location: 13973-14750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BRCT_DNA_ligase_like (cd17748), RVT-UG22, COG5635 (Predicted NTPase, NACHT family domain )