myRT

myRT report for GCA_004193275.1_ASM419327v1

Download annotations/find similar RTs

Seq: SEDT01001166.1 (1610 bp)
Overview 1 RT 1: 1-1607 bp Neighborhood of RT #1 [1, 1607] HsdM RVT-Retrons Feature: gene Location: 1-507 bp Feature: domain Description: HsdM Location: 13-505 bp Feature: domain Description: HsdM Location: 1 3-505 bp Feature: gene Location: 508-1425 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 553-1174 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 553-1 1 74 bp Feature: gene Location: 1476-1607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-Retrons

Seq: SEDT01000004.1 (31078 bp)
Overview 1 RT 1: 3-2122 bp Neighborhood of RT #1 [3, 2122] GIIM RVT-GII Feature: gene Location: 3-326 bp Feature: domain Description: GIIM Note: maturase Location: 96-303 bp Feature: domain Description: GIIM Note: maturase Location: 96-303 bp Feature: gene Location: 480-1241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816-1239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816-12 39 bp Feature: gene Location: 1335-1652 bp Feature: gene Location: 1691-2122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII

Seq: SEDT01000495.1 (2476 bp)
Overview 1 RT 1: 237-2425 bp Neighborhood of RT #1 [237, 2475] PHA02517 PHA02517 RVT-GII GIIM YfcH Feature: gene Location: 237-473 bp Feature: domain Description: PHA02517 Location: 243-459 bp Feature: domain Description: PHA02517 Location: 243 -459 bp Feature: gene Location: 498-1106 bp Feature: domain Description: PHA02517 Location: 564-1101 bp Feature: domain Description: PHA02517 Location: 564-1101 bp Feature: gene Location: 1206-2048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1212-1665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1212-1665 bp Feature: domain Description: GIIM Note: maturase Location: 1749-1965 bp Feature: domain Description: GIIM Note: maturase Location: 1749-1965 bp Feature: gene Location: 2167-2475 bp Feature: domain Description: YfcH Location: 2170-2425 bp Feature: domain Description: YfcH Location: 2170-2425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), YfcH (COG1090)

Seq: SEDT01000412.1 (2701 bp)
Overview 1 RT 1: 3-2638 bp Neighborhood of RT #1 [3, 2700] GIIM RVT-GII GIIM RVT-GII Feature: gene Location: 3-326 bp Feature: domain Description: GIIM Note: maturase Location: 96-303 bp Feature: domain Description: GIIM Note: maturase Location: 96-303 bp Feature: gene Location: 511-1758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715-1375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715-1375 bp Feature: domain Description: GIIM Note: maturase Location: 1453-1675 bp Feature: domain Description: GIIM Note: maturase Location: 14 53-1675 bp Feature: gene Location: 2269-2700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2272-2638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2272-2638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII

Seq: SEDT01002026.1 (1208 bp)
Overview 1 RT 1: 63-1208 bp Neighborhood of RT #1 [63, 1207] InsE RVT-GII Feature: gene Location: 63-368 bp Feature: domain Description: InsE Location: 96-357 bp Feature: domain Description: InsE Location: 96-35 7 bp Feature: gene Location: 498-1052 bp Feature: gene Location: 872-1207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1076-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1076-1208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII

Seq: SEDT01001318.1 (1526 bp)
Overview 1 RT 1: 3-1524 bp Neighborhood of RT #1 [3, 1524] RVT-UG7 Feature: gene Location: 3-1217 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 438-819 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 438-819 bp Feature: gene Location: 1339-1524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: SEDT01002396.1 (1105 bp)
Overview 1 RT 1: 1-1101 bp Neighborhood of RT #1 [1, 1103] RVT-UG7 PRK14703 Feature: gene Location: 1-960 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 424-847 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 424-847 bp Feature: gene Location: 957-1103 bp Feature: domain Description: PRK14703 Location: 960-1101 bp Feature: domain Description: PRK147 03 Location: 960-1101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK14703 (glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional)

Seq: SEDT01000161.1 (4468 bp)
Overview 1 RT 1: 2532-4382 bp Neighborhood of RT #1 [2532, 4465] SapB PRK06500 RVT-GII GIIM Feature: gene Location: 2532-3014 bp Feature: domain Description: SapB Location: 2589-2988 bp Feature: domain Description: SapB Location: 258 9-298 8 bp Feature: gene Location: 3099-3227 bp Feature: domain Description: PRK06500 Location: 3105-3219 bp Feature: domain Description: PRK06500 Location: 3105-3219 bp Feature: gene Location: 3347-4465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3422-4082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3422-408 2 bp Feature: domain Description: GIIM Note: maturase Location: 4160-4382 bp Feature: domain Description: GIIM Note: maturase Location: 4160-438 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SapB (smart00741), PRK06500 (SDR family oxidoreductase), RVT-GII, GIIM (pfam08388)

Seq: SEDT01000223.1 (3722 bp)
Overview 1 RT 1: 3-3398 bp Neighborhood of RT #1 [3, 3398] RVT-UG2 Feature: gene Location: 3-398 bp Feature: gene Location: 773-2335 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1025-1946 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1025-19 46 bp Feature: gene Location: 2445-3161 bp Feature: gene Location: 3261-3398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: SEDT01000001.1 (81894 bp)
Overview 1 RT 1: 23379-26470 bp Neighborhood of RT #1 [23379, 26470] InsE RVT-GII Feature: gene Location: 23379-23651 bp Feature: domain Description: InsE Location: 23415-23646 bp Feature: domain Description: InsE Location: 23415-23646 bp Feature: gene Location: 23819-24457 bp Feature: gene Location: 24781-24930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24841-24925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24841-24925 bp Feature: gene Location: 25364-25696 bp Feature: gene Location: 26003-26470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII

Seq: SEDT01001704.1 (1323 bp)
Overview 1 RT 1: 3-1107 bp Neighborhood of RT #1 [3, 1322] RVT-UNC Feature: gene Location: 3-1322 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 693-1107 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 693-11 07 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-UG5/RVT-CRISPR/RVT-UG17(RVT-UNC)