myRT

myRT report for GCA_004193555.1_ASM419355v1

Download annotations/find similar RTs

Seq: RPGP01000003.1 (19603 bp)
Overview 1 RT 1: 5916-7242 bp Neighborhood of RT #1 [5916, 7242] RVT-GII Feature: gene Location: 5916-6044 bp Feature: gene Location: 6457-6630 bp Feature: gene Location: 6668-6829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6680-6824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6680-6824 bp Feature: gene Location: 6843-7001 bp Feature: gene Location: 7030-7242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPGP01000029.1 (534767 bp)
Overview 1 RT 1: 75337-84328 bp Neighborhood of RT #1 [75337, 84328] N6_Mtase RVT-GII RVT-GII Bac_DnaA_C RVT-GII Feature: gene Location: 75337-76866 bp Feature: domain Description: N6_Mtase Location: 75346-76048 bp Feature: domain Description: N6_Mtase Location: 75346-76048 bp Feature: gene Location: 77020-77151 bp Feature: gene Location: 77253-77615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77262-77607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772 62 -77607 bp Feature: gene Location: 77644-77892 bp Feature: gene Location: 78243-78416 bp Feature: gene Location: 78563-79252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78566-78911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78566-78911 bp Feature: gene Location: 79303-79902 bp Feature: domain Description: Bac_DnaA_C Location: 79651-79870 bp Feature: domain Description: Bac_DnaA_C Location: 79651-79870 bp Feature: gene Location: 79991-80320 bp Feature: gene Location: 81730-81879 bp Feature: gene Location: 82030-82245 bp Feature: gene Location: 82343-83119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82598-83060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 598-83060 bp Feature: gene Location: 83238-83375 bp Feature: gene Location: 84170-84328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), RVT-GII, Bac_DnaA_C (smart00760)

Seq: RPGP01000001.1 (1248101 bp)
Overview 1 RT 1: 342961-348170 bp 2 RT 2: 419859-428439 bp 3 RT 3: 438900-442137 bp 4 RT 4: 1094887-1098359 bp Neighborhood of RT #1 [342961, 348170] Dob10 Dob10 Bro-N RVT-GII Neighborhood of RT #2 [419859, 428439] BrnT_toxin DUF4268 RVT-GII COG2842 COG4584 COG4584 IstB_IS21 group_II_RT_mat RVT-GII GIIM Neighborhood of RT #3 [438900, 442137] FocA RVT-GII GIIM Neighborhood of RT #4 [1094887, 1098359] RVT-Retrons COG4185 Feature: gene Location: 342961-345090 bp Feature: domain Description: Dob10 Location: 343102-344470 bp Feature: domain Description: Dob10 Location: 3 43 102-3 44470 bp Feature: domain Description: Dob10 Location: 344482-344989 bp Feature: domain Description: Dob10 Location: 3 44482-3 44989 bp Feature: gene Location: 345291-346145 bp Feature: domain Description: Bro-N Location: 345339-345639 bp Feature: domain Description: Bro-N Location: 3 453 3 9-3 4563 9 bp Feature: gene Location: 346341-347621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 346596-347268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 46596-3 47268 bp Feature: gene Location: 347719-347934 bp Feature: gene Location: 347976-348170 bp Feature: gene Location: 419859-420077 bp Feature: domain Description: BrnT_toxin Location: 419880-420042 bp Feature: domain Description: BrnT_toxin Location: 419880-420042 bp Feature: gene Location: 420179-421105 bp Feature: domain Description: DUF4268 Location: 420695-421094 bp Feature: domain Description: DUF4268 Location: 420695-421094 bp Feature: gene Location: 421249-422010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421345-421657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4213 45-421657 bp Feature: gene Location: 422074-423621 bp Feature: domain Description: COG2842 Location: 422086-422218 bp Feature: domain Description: COG2842 Location: 422086-422218 bp Feature: domain Description: COG4584 Location: 422347-422959 bp Feature: domain Description: COG4584 Location: 4223 47-422959 bp Feature: domain Description: COG4584 Location: 423076-423508 bp Feature: domain Description: COG4584 Location: 423 076-423 508 bp Feature: gene Location: 423636-424373 bp Feature: domain Description: IstB_IS21 Location: 423798-424329 bp Feature: domain Description: IstB_IS21 Location: 423 798-4243 29 bp Feature: gene Location: 425747-426181 bp Feature: gene Location: 426996-427244 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 427062-427233 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 427062-42723 3 bp Feature: gene Location: 427288-427707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427294-427675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427294-427675 bp Feature: gene Location: 427996-428217 bp Feature: domain Description: GIIM Note: maturase Location: 428014-428149 bp Feature: domain Description: GIIM Note: maturase Location: 428014-428149 bp Feature: gene Location: 428308-428439 bp Feature: gene Location: 438900-439727 bp Feature: domain Description: FocA Location: 438990-439692 bp Feature: domain Description: FocA Location: 43 8990-43 9692 bp Feature: gene Location: 439750-439884 bp Feature: gene Location: 440134-441366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440338-440995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4403 3 8-440995 bp Feature: domain Description: GIIM Note: maturase Location: 441076-441301 bp Feature: domain Description: GIIM Note: maturase Location: 441076-4413 01 bp Feature: gene Location: 441414-441695 bp Feature: gene Location: 441955-442137 bp Feature: gene Location: 1094887-1095378 bp Feature: gene Location: 1095481-1096041 bp Feature: gene Location: 1096041-1097519 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1096722-1097277 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1096722-1097277 bp Feature: gene Location: 1097650-1098165 bp Feature: domain Description: COG4185 Location: 1097662-1098157 bp Feature: domain Description: COG4185 Location: 1097662-1098157 bp Feature: gene Location: 1098168-1098359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dob10 (COG4581), Bro-N (smart01040), RVT-GII, BrnT_toxin (pfam04365), DUF4268 (pfam14088), COG2842 (Bacteriophage DNA transposition protein, AAA+ family ATPase ), COG4584 (Transposase ), IstB_IS21 (pfam01695), group_II_RT_mat (TIGR04416), GIIM (pfam08388)
FocA (COG2116), RVT-Retrons, COG4185 (Predicted ABC-type ATPase )

Seq: RPGP01000040.1 (1330458 bp)
Overview 1 RT 1: 835352-838456 bp 2 RT 2: 1008532-1010932 bp Neighborhood of RT #1 [835352, 838456] COG1669 COG2361 RVT-GII GIIM Neighborhood of RT #2 [1008532, 1010976] Unstab_antitox RVT-GII RT_G2_intron DUF1780 Y1_Tnp Feature: gene Location: 835352-835630 bp Feature: domain Description: COG1669 Location: 835370-835625 bp Feature: domain Description: COG1669 Location: 835370-835625 bp Feature: gene Location: 835627-835968 bp Feature: domain Description: COG2361 Location: 835633-835954 bp Feature: domain Description: COG2361 Location: 835633-835954 bp Feature: gene Location: 836081-837175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836126-836744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836126-83674 4 bp Feature: domain Description: GIIM Note: maturase Location: 836786-836981 bp Feature: domain Description: GIIM Note: maturase Location: 836786-836981 bp Feature: gene Location: 837657-837953 bp Feature: gene Location: 838196-838456 bp Feature: gene Location: 1008532-1008759 bp Feature: domain Description: Unstab_antitox Location: 1008574-1008715 bp Feature: domain Description: Unstab_antitox Location: 1008574 -1008715 bp Feature: gene Location: 1008773-1008952 bp Feature: gene Location: 1009279-1009926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009555-1009750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009555-1009750 bp Feature: domain Description: RT_G2_intron Location: 1009771-1009846 bp Feature: domain Description: RT_G2_intron Location: 1009771-100984 6 bp Feature: gene Location: 1010100-1010453 bp Feature: domain Description: DUF1780 Location: 1010145-1010379 bp Feature: domain Description: DUF1780 Location: 101014 5-1010379 bp Feature: gene Location: 1010716-1010976 bp Feature: domain Description: Y1_Tnp Location: 1010719-1010932 bp Feature: domain Description: Y1_Tnp Location: 1010719-1010932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1669 (Predicted nucleotidyltransferase ), COG2361 (Uncharacterized conserved protein, contains HEPN domain ), RVT-GII, GIIM (pfam08388), Unstab_antitox (pfam09720), RT_G2_intron (cd01651), DUF1780 (pfam08682), Y1_Tnp (pfam01797)