myRT

myRT report for GCA_004195335.1_ASM419533v1

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Seq: SDWK01000385.1 (2301 bp)
Overview 1 RT 1: 560-1892 bp Neighborhood of RT #1 [560, 2116] RVT_N RVT-GII GIIM Feature: gene Location: 560-2116 bp Feature: domain Description: RVT_N Location: 692-935 bp Feature: domain Description: RVT_N Location: 692-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 980-1607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 980-1 607 bp Feature: domain Description: GIIM Note: maturase Location: 1664-1892 bp Feature: domain Description: GIIM Note: maturase Location: 1 664-1 892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SDWK01000619.1 (4093 bp)
Overview 1 RT 1: 2-1928 bp Neighborhood of RT #1 [2, 3913] UPF0016 RVT-UG5 Feature: gene Location: 2-142 bp Feature: domain Description: UPF0016 Location: 53-143 bp Feature: domain Description: UPF0016 Location: 53-143 bp Feature: gene Location: 980-3913 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1478-1928 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1478-192 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0016 (pfam01169), RVT-UG5

Seq: SDWK01000613.1 (2158 bp)
Overview 1 RT 1: 200-1772 bp Neighborhood of RT #1 [200, 1996] RVT_N RVT-GII GIIM Feature: gene Location: 200-1996 bp Feature: domain Description: RVT_N Location: 572-815 bp Feature: domain Description: RVT_N Location: 572-815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 860-1487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 860-1487 bp Feature: domain Description: GIIM Note: maturase Location: 1547-1772 bp Feature: domain Description: GIIM Note: maturase Location: 1547-1772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SDWK01000053.1 (3499 bp)
Overview 1 RT 1: 544-3498 bp Neighborhood of RT #1 [544, 3498] PHA02517 RVT-GII GIIM rve_2 Feature: gene Location: 544-1137 bp Feature: domain Description: PHA02517 Location: 553-1087 bp Feature: domain Description: PHA02517 Location: 553-1087 bp Feature: gene Location: 1273-1611 bp Feature: gene Location: 1630-2871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1828-2485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1828-24 85 bp Feature: domain Description: GIIM Note: maturase Location: 2566-2800 bp Feature: domain Description: GIIM Note: maturase Location: 2566-2800 bp Feature: gene Location: 2956-3129 bp Feature: domain Description: rve_2 Location: 2962-3118 bp Feature: domain Description: rve_2 Location: 2962-3118 bp Feature: gene Location: 3169-3498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), rve_2 (pfam13333)

Seq: SDWK01000101.1 (3455 bp)
Overview 1 RT 1: 3-3454 bp Neighborhood of RT #1 [3, 3454] WrbA RVT-GII GIIM Feature: gene Location: 3-146 bp Feature: gene Location: 191-754 bp Feature: domain Description: WrbA Location: 194-584 bp Feature: domain Description: WrbA Location: 194-5 84 bp Feature: gene Location: 982-2229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1186-1840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1186-1840 bp Feature: domain Description: GIIM Note: maturase Location: 1924-2155 bp Feature: domain Description: GIIM Note: maturase Location: 1924-215 5 bp Feature: gene Location: 2759-2929 bp Feature: gene Location: 3314-3454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WrbA (COG0655), RVT-GII, GIIM (pfam08388)

Seq: SDWK01000804.1 (2646 bp)
Overview 1 RT 1: 2-2197 bp Neighborhood of RT #1 [2, 2202] RVT-GII GIIM ParE Feature: gene Location: 2-1345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308-977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308-977 bp Feature: domain Description: GIIM Note: maturase Location: 1046-1268 bp Feature: domain Description: GIIM Note: maturase Location: 1046 -126 8 bp Feature: gene Location: 1499-1819 bp Feature: gene Location: 1927-2202 bp Feature: domain Description: ParE Location: 1936-2197 bp Feature: domain Description: ParE Location: 1936 -2197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ParE (COG3668)

Seq: SDWK01000550.1 (2335 bp)
Overview 1 RT 1: 286-2127 bp Neighborhood of RT #1 [286, 2127] RVT_N RVT-GII GIIM Feature: gene Location: 286-1842 bp Feature: domain Description: RVT_N Location: 418-661 bp Feature: domain Description: RVT_N Location: 418-661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 706-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 06-1333 bp Feature: domain Description: GIIM Note: maturase Location: 1396-1618 bp Feature: domain Description: GIIM Note: maturase Location: 1396-1618 bp Feature: gene Location: 1906-2127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SDWK01000703.1 (2202 bp)
Overview 1 RT 1: 2-182 bp Neighborhood of RT #1 [2, 2200] RVT-UG1 Feature: gene Location: 2-2200 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 11-182 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 11-18 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1