myRT

myRT report for GCA_004208845.1_ASM420884v1

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Seq: SGPI01000016.1 (219423 bp)
Overview 1 RT 1: 72360-79409 bp Neighborhood of RT #1 [72360, 79738] Cas2_I_II_III CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III TIGR03986 Feature: gene Location: 72360-72521 bp Feature: gene Location: 72789-73079 bp Feature: domain Description: Cas2_I_II_III Location: 72804-73023 bp Feature: domain Description: Cas2_I_II_III Location: 72804-73023 bp Feature: gene Location: 73076-75805 bp Feature: domain Description: CRISPR_Cas6 Location: 73529-73886 bp Feature: domain Description: CRISPR_Cas6 Location: 73529-73886 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 74114-74714 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 741 1 4-7471 4 bp Feature: domain Description: Cas1_I-II-III Location: 74849-75767 bp Feature: domain Description: Cas1 _I-II-III Location: 74849-75767 bp Feature: gene Location: 75814-77670 bp Feature: gene Location: 77663-79738 bp Feature: domain Description: TIGR03986 Location: 77699-79409 bp Feature: domain Description: TIGR03986 Location: 77699-79409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), TIGR03986 (CRISPR-associated protein)

Seq: SGPI01000040.1 (401822 bp)
Overview 1 RT 1: 237457-243994 bp Neighborhood of RT #1 [237457, 245388] Methyltransf_23 Autoind_bind GerE RVT-Retrons tand_rpt_95 tand_rpt_95 CarboxypepD_reg VWD Feature: gene Location: 237457-238695 bp Feature: domain Description: Methyltransf_23 Location: 238144-238636 bp Feature: domain Description: Methyltransf_2 3 Location: 2 38144-2 38636 bp Feature: gene Location: 238706-239452 bp Feature: domain Description: Autoind_bind Location: 238757-239213 bp Feature: domain Description: Autoind_bind Location: 2 38757-2 392 13 bp Feature: domain Description: GerE Location: 239273-239357 bp Feature: domain Description: GerE Location: 2 392 73-2 39357 bp Feature: gene Location: 239593-240405 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 239659-240169 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 39659-2 40169 bp Feature: gene Location: 240443-240709 bp Feature: gene Location: 241219-245388 bp Feature: domain Description: tand_rpt_95 Location: 241444-241690 bp Feature: domain Description: tand_rpt_95 Location: 2 41444-2 41690 bp Feature: domain Description: tand_rpt_95 Location: 241834-241951 bp Feature: domain Description: tand_rpt_95 Location: 2 41834-2 41951 bp Feature: domain Description: CarboxypepD_reg Location: 243211-243442 bp Feature: domain Description: CarboxypepD_reg Location: 2 432 11-2 43442 bp Feature: domain Description: VWD Location: 243520-243994 bp Feature: domain Description: VWD Location: 2 4352 0-2 43994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_23 (pfam13489), Autoind_bind (pfam03472), GerE (pfam00196), RVT-Retrons, tand_rpt_95 (NF012211), CarboxypepD_reg (pfam13620), VWD (smart00216)