myRT

myRT report for GCA_004209275.1_ASM420927v1

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Seq: SGOL01000542.1 (491 bp)
Overview 1 RT 1: 126-486 bp Neighborhood of RT #1 [126, 488] RVT-Retrons Feature: gene Location: 126-488 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 339-486 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 339-486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SGOL01000047.1 (13756 bp)
Overview 1 RT 1: 101-4138 bp Neighborhood of RT #1 [101, 4138] RVT-Retrons AAA_15 Feature: gene Location: 101-559 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 281-482 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 81-482 bp Feature: gene Location: 674-2950 bp Feature: domain Description: AAA_15 Location: 707-1715 bp Feature: domain Description: AAA_15 Location: 707-1715 bp Feature: gene Location: 3833-4138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175)

Seq: SGOL01000018.1 (110944 bp)
Overview 1 RT 1: 65091-74405 bp 2 RT 2: 85937-89787 bp Neighborhood of RT #1 [65091, 75001] Tail_P2_I YjdB LRR_3 LRR_3 LRR_3 COG5301 RVT-UG15 COG3499 tape_meas_TP901 COG5283 Neighborhood of RT #2 [85937, 89789] RVT-GII PRK10276 umuC Feature: gene Location: 65091-68117 bp Feature: domain Description: Tail_P2_I Location: 65121-65541 bp Feature: domain Description: Tail_P2_I Location: 65121-65541 bp Feature: domain Description: YjdB Location: 65670-65907 bp Feature: domain Description: YjdB Location: 65670-65907 bp Feature: domain Description: LRR_3 Location: 66273-66585 bp Feature: domain Description: LRR_3 Location: 66273 -66585 bp Feature: domain Description: LRR_3 Location: 66918-67302 bp Feature: domain Description: LRR_3 Location: 66918-673 02 bp Feature: domain Description: LRR_3 Location: 67560-67908 bp Feature: domain Description: LRR_3 Location: 67560-67908 bp Feature: gene Location: 68326-69423 bp Feature: domain Description: COG5301 Location: 68347-68812 bp Feature: domain Description: COG53 01 Location: 683 47-68812 bp Feature: gene Location: 69616-70905 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 69703-70126 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 69703 -70126 bp Feature: gene Location: 71519-72010 bp Feature: domain Description: COG3499 Location: 71522-71954 bp Feature: domain Description: COG3 499 Location: 71522-71954 bp Feature: gene Location: 72026-75001 bp Feature: domain Description: tape_meas_TP901 Location: 72590-73643 bp Feature: domain Description: tape_meas_TP901 Location: 72590-73 643 bp Feature: domain Description: COG5283 Location: 74000-74405 bp Feature: domain Description: COG5283 Location: 74000-74405 bp Feature: gene Location: 85937-86083 bp Feature: gene Location: 86086-86382 bp Feature: gene Location: 86536-88023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86941-87631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86941-8763 1 bp Feature: gene Location: 88102-88521 bp Feature: domain Description: PRK10276 Location: 88105-88516 bp Feature: domain Description: PRK10276 Location: 88105-88516 bp Feature: gene Location: 88524-89789 bp Feature: domain Description: umuC Location: 88527-89787 bp Feature: domain Description: umuC Location: 88527-89787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tail_P2_I (pfam09684), YjdB (COG5492), LRR_3 (sd00036), COG5301 (Phage-related tail fibre protein ), RVT-UG15, COG3499 (Phage protein U ), tape_meas_TP901 (TIGR01760), COG5283 (Phage-related tail protein ), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)
umuC (PRK03609)

Seq: SGOL01000446.1 (585 bp)
Overview 1 RT 1: 1-523 bp Neighborhood of RT #1 [1, 582] RVT-GII Feature: gene Location: 1-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SGOL01000026.1 (85330 bp)
Overview 1 RT 1: 82755-84813 bp Neighborhood of RT #1 [82755, 85199] Nuc_deoxyrib_tr RVT-Retrons Feature: gene Location: 82755-83006 bp Feature: gene Location: 83036-83872 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 83525-83696 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 835 25 -83696 bp Feature: gene Location: 84528-85199 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84573-84813 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 845 73-84813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons