myRT

myRT report for GCA_004210305.1_ASM421030v1

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Seq: SCFB01000004.1 (373660 bp)
Overview 1 RT 1: 19679-23309 bp Neighborhood of RT #1 [19679, 23350] KOG1663 InsE RVT-GII GIIM rve_3 Feature: gene Location: 19679-20227 bp Feature: domain Description: KOG1663 Location: 19709-20189 bp Feature: domain Description: KOG1 663 Location: 1 9709-201 89 bp Feature: gene Location: 20272-20550 bp Feature: domain Description: InsE Location: 20287-20542 bp Feature: domain Description: InsE Location: 20287-20542 bp Feature: gene Location: 21293-22750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21704-22373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 704-22373 bp Feature: domain Description: GIIM Note: maturase Location: 22442-22664 bp Feature: domain Description: GIIM Note: maturase Location: 22442-22664 bp Feature: gene Location: 22760-22927 bp Feature: gene Location: 23177-23350 bp Feature: domain Description: rve_3 Location: 23189-23309 bp Feature: domain Description: rve_3 Location: 231 89-23309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCFB01000002.1 (174737 bp)
Overview 1 RT 1: 16105-21196 bp Neighborhood of RT #1 [16105, 21196] RfaE RVT-GII GIIM Feature: gene Location: 16105-17565 bp Feature: domain Description: RfaE Location: 16126-17554 bp Feature: domain Description: RfaE Location: 1612 6-17554 bp Feature: gene Location: 17603-18829 bp Feature: gene Location: 18979-20343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19285-19906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192 85-19906 bp Feature: domain Description: GIIM Note: maturase Location: 19954-20152 bp Feature: domain Description: GIIM Note: maturase Location: 19954-2 0152 bp Feature: gene Location: 20524-20709 bp Feature: gene Location: 20870-21196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCFB01000015.1 (60903 bp)
Overview 1 RT 1: 37876-42347 bp Neighborhood of RT #1 [37876, 42427] rplM rpsI RVT-GII GIIM NlpA YbgF Feature: gene Location: 37876-38340 bp Feature: domain Description: rplM Location: 37882-38305 bp Feature: domain Description: rplM Location: 3 7882-3 83 05 bp Feature: gene Location: 38343-38855 bp Feature: domain Description: rpsI Location: 38478-38853 bp Feature: domain Description: rpsI Location: 3 8478-3 8853 bp Feature: gene Location: 39379-40743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39685-40306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9685-403 06 bp Feature: domain Description: GIIM Note: maturase Location: 40354-40552 bp Feature: domain Description: GIIM Note: maturase Location: 403 54-40552 bp Feature: gene Location: 40905-41720 bp Feature: domain Description: NlpA Location: 40917-41712 bp Feature: domain Description: NlpA Location: 40917-41712 bp Feature: gene Location: 41717-42427 bp Feature: domain Description: YbgF Location: 41873-42347 bp Feature: domain Description: YbgF Location: 41873 -423 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCFB01000011.1 (33075 bp)
Overview 1 RT 1: 57-6930 bp Neighborhood of RT #1 [57, 6930] Tnp_DNA_bind DDE_Tnp_1_5 DDE_Tnp_1_3 RVT-GII GIIM Feature: gene Location: 57-638 bp Feature: domain Description: Tnp_DNA_bind Location: 99-270 bp Feature: domain Description: Tnp_DNA_bind Location: 99-270 bp Feature: gene Location: 1169-1879 bp Feature: domain Description: DDE_Tnp_1_5 Location: 1292-1628 bp Feature: domain Description: DDE_Tnp_1_5 Location: 1292-1628 bp Feature: domain Description: DDE_Tnp_1_3 Location: 1682-1823 bp Feature: domain Description: DDE_Tnp_1_3 Location: 1682-1823 bp Feature: gene Location: 2052-3416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2358-2979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2358-2979 bp Feature: domain Description: GIIM Note: maturase Location: 3027-3225 bp Feature: domain Description: GIIM Note: maturase Location: 3027-3225 bp Feature: gene Location: 3940-5268 bp Feature: gene Location: 5395-6930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT