myRT

myRT report for GCA_004211075.1_ASM421107v1

Download annotations/find similar RTs

Seq: SECD01000838.1 (1611 bp)
Overview 1 RT 1: 2-1599 bp Neighborhood of RT #1 [2, 1610] RVT-UG12 Recombinase Feature: gene Location: 2-937 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 383-809 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 383-809 bp Feature: gene Location: 1311-1610 bp Feature: domain Description: Recombinase Location: 1476-1599 bp Feature: domain Description: Recombinase Location: 1 476-1 599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, Recombinase (pfam07508)

Seq: SECD01000282.1 (2754 bp)
Overview 1 RT 1: 1-2724 bp Neighborhood of RT #1 [1, 2753] RNase_HI_RT_Ty3 Integrase_H2C2 rve CD_POL_like RVT-UNC Feature: gene Location: 1-186 bp Feature: gene Location: 322-2457 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 433-793 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 433-793 bp Feature: domain Description: Integrase_H2C2 Location: 1138-1312 bp Feature: domain Description: Integrase_H2 C2 Location: 1138-1312 bp Feature: domain Description: rve Location: 1378-1699 bp Feature: domain Description: rve Location: 1378-1699 bp Feature: domain Description: CD_POL_like Location: 2260-2407 bp Feature: domain Description: CD_POL_like Location: 2 2 60-2 407 bp Feature: gene Location: 2412-2753 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2574-2724 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2 574-2 72 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), CD_POL_like (cd18979), RVT-GII/RVT-UG26/RVT-UG17/RVT-UG4(RVT-UNC)

Seq: SECD01000820.1 (1623 bp)
Overview 1 RT 1: 327-1603 bp Neighborhood of RT #1 [327, 1620] RVT-GII Feature: gene Location: 327-461 bp Feature: gene Location: 808-1620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1012-1603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1012-1603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SECD01000599.1 (1928 bp)
Overview 1 RT 1: 65-1724 bp Neighborhood of RT #1 [65, 1927] RVT-UNC Peptidase_A17 Feature: gene Location: 65-1927 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 965-1076 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 965-1076 bp Feature: domain Description: Peptidase_A17 Location: 1244-1724 bp Feature: domain Description: Peptidase_A17 Location: 124 4 -1724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10/RVT-UG13/RVT-UG24(RVT-UNC), Peptidase_A17 (pfam05380)

Seq: SECD01000965.1 (1498 bp)
Overview 1 RT 1: 552-1494 bp Neighborhood of RT #1 [552, 1496] RVT-GII Feature: gene Location: 552-1496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816-1494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816-1494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SECD01000395.1 (2331 bp)
Overview 1 RT 1: 3-2330 bp Neighborhood of RT #1 [3, 2330] RVT-CRISPR-like Rnase_HI_RT_non_LTR zf-RVT Feature: gene Location: 3-2105 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 36-696 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 36 -6 96 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 1266-1632 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 126 6 -16 32 bp Feature: domain Description: zf-RVT Location: 1851-1977 bp Feature: domain Description: zf-RVT Location: 1851-1977 bp Feature: gene Location: 2181-2330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Rnase_HI_RT_non_LTR (cd09276), zf-RVT (pfam13966)

Seq: SECD01000111.1 (6198 bp)
Overview 1 RT 1: 3087-5784 bp Neighborhood of RT #1 [3087, 6131] SMODS SLATT_4 RVT-UG2 Feature: gene Location: 3087-3905 bp Feature: domain Description: SMODS Location: 3114-3591 bp Feature: domain Description: SMODS Location: 3114-3591 bp Feature: gene Location: 3907-4428 bp Feature: domain Description: SLATT_4 Location: 3955-4405 bp Feature: domain Description: SLATT_4 Location: 3955-4405 bp Feature: gene Location: 4707-6131 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4992-5784 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4992-57 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMODS (pfam18144), SLATT_4 (pfam18186), RVT-UG2

Seq: SECD01002128.1 (1011 bp)
Overview 1 RT 1: 3-1011 bp Neighborhood of RT #1 [3, 1010] RVT-Retrons RT_RNaseH_2 Feature: gene Location: 3-1010 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 462-612 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 462-612 bp Feature: domain Description: RT_RNaseH_2 Location: 837-1011 bp Feature: domain Description: RT_RNaseH_2 Location: 8 37-1011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, RT_RNaseH_2 (pfam17919)

Seq: SECD01000492.1 (2100 bp)
Overview 1 RT 1: 3-2099 bp Neighborhood of RT #1 [3, 2099] RVT-Retrons Feature: gene Location: 3-1577 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132-762 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132-762 bp Feature: gene Location: 1815-2099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SECD01002006.1 (1039 bp)
Overview 1 RT 1: 116-1039 bp Neighborhood of RT #1 [116, 1038] RVT-UG2 Feature: gene Location: 116-316 bp Feature: gene Location: 427-1038 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 718-1039 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 718-10 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2