myRT

myRT report for GCA_004211415.1_ASM421141v1

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Seq: SEDD01000779.1 (3682 bp)
Overview 1 RT 1: 143-3480 bp Neighborhood of RT #1 [143, 3581] LGT_LGT_LGT_TIGR03299 RVT_N RVT-GII GIIM HNHc DUF932 Feature: gene Location: 143-745 bp Feature: domain Description: LGT_LGT_LGT_TIGR03299 Location: 206-725 bp Feature: domain Description: LGT_LGT_LGT_TIGR03299 Location: 206-725 bp Feature: gene Location: 803-961 bp Feature: gene Location: 1251-3062 bp Feature: domain Description: RVT_N Location: 1287-1533 bp Feature: domain Description: RVT_N Location: 1 287-1 533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1581-2295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 581 -2295 bp Feature: domain Description: GIIM Note: maturase Location: 2379-2625 bp Feature: domain Description: GIIM Note: maturase Location: 2379-2625 bp Feature: domain Description: HNHc Note: nucleases Location: 2832-2967 bp Feature: domain Description: HNHc Note: nucleases Location: 2832-2967 bp Feature: gene Location: 3156-3581 bp Feature: domain Description: DUF932 Location: 3162-3480 bp Feature: domain Description: DUF932 Location: 31 62-3480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LGT_LGT_LGT_TIGR03299, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF932 (pfam06067)

Seq: SEDD01002630.1 (1527 bp)
Overview 1 RT 1: 1-1524 bp Neighborhood of RT #1 [1, 1524] RVT-Retrons Feature: gene Location: 1-498 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 244-493 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 44-493 bp Feature: gene Location: 553-1524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SEDD01000714.1 (3941 bp)
Overview 1 RT 1: 1-3937 bp Neighborhood of RT #1 [1, 3939] Bac_Flav_CT_G RVT-GII Intron_maturas2 KOG4768 Bac_Flav_CT_G Feature: gene Location: 1-1107 bp Feature: domain Description: Bac_Flav_CT_G Location: 4-1096 bp Feature: domain Description: Bac_Flav_CT_G Location: 4-1096 bp Feature: gene Location: 1658-3319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1922-2741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1922-2741 bp Feature: domain Description: Intron_maturas2 Location: 2813-3203 bp Feature: domain Description: Intron_maturas2 Location: 2813 -3 203 bp Feature: gene Location: 3335-3466 bp Feature: domain Description: KOG4768 Location: 3338-3464 bp Feature: domain Description: KOG4768 Location: 3 3 3 8-3 464 bp Feature: gene Location: 3541-3939 bp Feature: domain Description: Bac_Flav_CT_G Location: 3583-3937 bp Feature: domain Description: Bac_Flav_CT_G Location: 3 583 -3 93 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: SEDD01001254.1 (2602 bp)
Overview 1 RT 1: 3-2584 bp Neighborhood of RT #1 [3, 2584] RVT-GII GIIM Feature: gene Location: 3-236 bp Feature: gene Location: 562-1839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787-1462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787-14 62 bp Feature: domain Description: GIIM Note: maturase Location: 1573-1759 bp Feature: domain Description: GIIM Note: maturase Location: 1573-1759 bp Feature: gene Location: 1851-2348 bp Feature: gene Location: 2390-2584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SEDD01004995.1 (1006 bp)
Overview 1 RT 1: 2-1001 bp Neighborhood of RT #1 [2, 1003] RVT-UG28b Feature: gene Location: 2-1003 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 425-1001 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 425 -1001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b

Seq: SEDD01002956.1 (1411 bp)
Overview 1 RT 1: 3-1410 bp Neighborhood of RT #1 [3, 1409] RVT-GII Feature: gene Location: 3-224 bp Feature: gene Location: 585-761 bp Feature: gene Location: 1152-1409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1356-1410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1356 -1410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SEDD01001691.1 (2075 bp)
Overview 1 RT 1: 125-1982 bp Neighborhood of RT #1 [125, 1982] RVT-GII GIIM Feature: gene Location: 125-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-941 bp Feature: domain Description: GIIM Note: maturase Location: 998-1223 bp Feature: domain Description: GIIM Note: maturase Location: 998-1223 bp Feature: gene Location: 1647-1982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)