myRT

myRT report for GCA_004211555.1_ASM421155v1

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Seq: SEBL01000478.1 (2366 bp)
Overview 1 RT 1: 2-1603 bp Neighborhood of RT #1 [2, 2364] RVT-UG8 RVT-UG3 Feature: gene Location: 2-931 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 593-932 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 593-932 bp Feature: gene Location: 931-2364 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1147-1603 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 1 47-1 603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3

Seq: SEBL01001337.1 (1441 bp)
Overview 1 RT 1: 2-785 bp Neighborhood of RT #1 [2, 817] RVT-UG2 Feature: gene Location: 2-817 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 245-785 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 45-785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: SEBL01000636.1 (2055 bp)
Overview 1 RT 1: 2-1916 bp Neighborhood of RT #1 [2, 2053] RVT-UG13 TIR_2 M3A_DCP Feature: gene Location: 2-1063 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 95-581 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 95-581 bp Feature: gene Location: 1199-2053 bp Feature: domain Description: TIR_2 Location: 1220-1559 bp Feature: domain Description: TIR_2 Location: 1220-1559 bp Feature: domain Description: M3A_DCP Location: 1628-1916 bp Feature: domain Description: M3 A_DCP Location: 1628-1916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13, TIR_2 (pfam13676), M3A_DCP (cd06456)

Seq: SEBL01000854.1 (1788 bp)
Overview 1 RT 1: 1-1708 bp Neighborhood of RT #1 [1, 1785] DEDDh group_II_RT_mat RVT-UG24 Feature: gene Location: 1-321 bp Feature: domain Description: DEDDh Location: 109-316 bp Feature: domain Description: DEDDh Location: 109-316 bp Feature: gene Location: 970-1785 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1057-1327 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1057-1327 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 1606-1708 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 1606-1708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDDh (cd06127), group_II_RT_mat (TIGR04416), RVT-UG24

Seq: SEBL01000183.1 (3586 bp)
Overview 1 RT 1: 2-2264 bp Neighborhood of RT #1 [2, 2617] AtoC RVT-UG2 Feature: gene Location: 2-463 bp Feature: domain Description: AtoC Location: 11-371 bp Feature: domain Description: AtoC Location: 11-371 bp Feature: gene Location: 844-1059 bp Feature: gene Location: 1091-2617 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1349-2264 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1349-2264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AtoC (COG2204), RVT-UG2

Seq: SEBL01000510.1 (2285 bp)
Overview 1 RT 1: 1-2235 bp Neighborhood of RT #1 [1, 2282] RVT-UG2 Feature: gene Location: 1-660 bp Feature: gene Location: 981-2282 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1287-2235 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1287-2235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: SEBL01000566.1 (2172 bp)
Overview 1 RT 1: 3-2107 bp Neighborhood of RT #1 [3, 2169] group_II_RT_mat RVT-UG19 RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Feature: gene Location: 3-1304 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18-177 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18-17 7 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 261-756 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 261-7 56 bp Feature: gene Location: 1408-2169 bp Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 1414-1552 bp Feature: domain Description: RMtype1_S_Sau1132ORF37 80P-TRD2-CR2_like Location: 1414-1552 bp Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 1648-2107 bp Feature: domain Description: RMtype1_S_Sau1132ORF37 80P-TRD2-CR2_like Location: 1648-2107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG19, RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like (cd17266)

Seq: SEBL01001744.1 (1263 bp)
Overview 1 RT 1: 1-1261 bp Neighborhood of RT #1 [1, 1261] RVT-Retrons Feature: gene Location: 1-678 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43-316 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43-316 bp Feature: gene Location: 683-1261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SEBL01001553.1 (1334 bp)
Overview 1 RT 1: 56-1244 bp Neighborhood of RT #1 [56, 1333] RVT-CRISPR-like GIY-YIG_unchar_3 Feature: gene Location: 56-1048 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 80-266 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 80-266 bp Feature: gene Location: 1112-1333 bp Feature: domain Description: GIY-YIG_unchar_3 Location: 1115-1244 bp Feature: domain Description: GIY-YIG_unchar_3 Location: 1115-1244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIY-YIG_unchar_3 (cd10448)

Seq: SEBL01000795.1 (1865 bp)
Overview 1 RT 1: 154-1860 bp Neighborhood of RT #1 [154, 1862] RVT-UG13 PRK06556 Feature: gene Location: 154-1569 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 604-1084 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 604-10 84 bp Feature: gene Location: 1677-1862 bp Feature: domain Description: PRK06556 Location: 1710-1860 bp Feature: domain Description: PRK06556 Location: 1710 -1860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13, PRK06556 (vitamin B12-dependent ribonucleotide reductase; Validated)

Seq: SEBL01002362.1 (1086 bp)
Overview 1 RT 1: 3-851 bp Neighborhood of RT #1 [3, 1084] GstA RVT-Retrons Feature: gene Location: 3-401 bp Feature: domain Description: GstA Location: 69-366 bp Feature: domain Description: GstA Location: 69-366 bp Feature: gene Location: 440-1084 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 443-851 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 443-851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GstA (COG0625), RVT-Retrons