myRT

myRT report for GCA_004212675.1_ASM421267v1

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Seq: PSRS01000409.1 (2385 bp)
Overview 1 RT 1: 1-1915 bp Neighborhood of RT #1 [1, 1956] RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16-670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6-670 bp Feature: domain Description: GIIM Note: maturase Location: 757-967 bp Feature: domain Description: GIIM Note: maturase Location: 757-967 bp Feature: gene Location: 1116-1418 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1146-1407 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 46-1 407 bp Feature: gene Location: 1693-1956 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1696-1783 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 696-1 783 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1804-1915 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 804-1 91 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: PSRS01000375.1 (3584 bp)
Overview 1 RT 1: 753-2663 bp Neighborhood of RT #1 [753, 2827] RVT-GII GIIM HTH_Tnp_1 Feature: gene Location: 753-2081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1008-1695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1008-1695 bp Feature: domain Description: GIIM Note: maturase Location: 1779-1986 bp Feature: domain Description: GIIM Note: maturase Location: 1779-1986 bp Feature: gene Location: 2159-2353 bp Feature: gene Location: 2429-2827 bp Feature: domain Description: HTH_Tnp_1 Location: 2504-2663 bp Feature: domain Description: HTH_Tnp_1 Location: 2 504-2 663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527)

Seq: PSRS01000591.1 (401 bp)
Overview 1 RT 1: 1-322 bp Neighborhood of RT #1 [1, 345] RVT-GII Feature: gene Location: 1-345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34-322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 4-3 22 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PSRS01000437.1 (1787 bp)
Overview 1 RT 1: 210-1476 bp Neighborhood of RT #1 [210, 1784] RVT-GII Feature: gene Location: 210-1784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-14 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PSRS01000289.1 (7819 bp)
Overview 1 RT 1: 4947-7817 bp Neighborhood of RT #1 [4947, 7817] COG3547 RVT-GII GIIM Feature: gene Location: 4947-5648 bp Feature: domain Description: COG3547 Location: 5067-5625 bp Feature: domain Description: COG35 47 Location: 5 067-5 625 bp Feature: gene Location: 5705-6691 bp Feature: gene Location: 6728-7606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6881-7079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6881-7079 bp Feature: domain Description: GIIM Note: maturase Location: 7160-7382 bp Feature: domain Description: GIIM Note: maturase Location: 7160-7382 bp Feature: gene Location: 7449-7817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: PSRS01000004.1 (165517 bp)
Overview 1 RT 1: 2-5480 bp Neighborhood of RT #1 [2, 5480] DUF4263 RVT-Retrons Feature: gene Location: 2-178 bp Feature: gene Location: 370-1518 bp Feature: domain Description: DUF4263 Location: 892-1405 bp Feature: domain Description: DUF426 3 Location: 892-1405 bp Feature: gene Location: 1537-3216 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1672-2293 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16 72-2293 bp Feature: gene Location: 3552-4307 bp Feature: gene Location: 4680-5480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4263 (pfam14082), RVT-Retrons

Seq: PSRS01000393.1 (2782 bp)
Overview 1 RT 1: 1-2779 bp Neighborhood of RT #1 [1, 2779] RVT-GII GIIM Feature: gene Location: 1-174 bp Feature: gene Location: 508-1836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 99-1462 bp Feature: domain Description: GIIM Note: maturase Location: 1528-1756 bp Feature: domain Description: GIIM Note: maturase Location: 1528-17 56 bp Feature: gene Location: 2339-2779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PSRS01000020.1 (74061 bp)
Overview 1 RT 1: 58593-65271 bp Neighborhood of RT #1 [58593, 65522] DAP2 RVT-GII AraC_binding_2 AraC GstA Feature: gene Location: 58593-60503 bp Feature: domain Description: DAP2 Location: 59019-60465 bp Feature: domain Description: DAP2 Location: 59019-60465 bp Feature: gene Location: 60966-61109 bp Feature: gene Location: 61913-63412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62327-63017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62327-63017 bp Feature: gene Location: 63671-64501 bp Feature: domain Description: AraC_binding_2 Location: 63782-64067 bp Feature: domain Description: AraC_binding_2 Location: 6378 2-64067 bp Feature: domain Description: AraC Location: 64172-64487 bp Feature: domain Description: AraC Location: 64172-6448 7 bp Feature: gene Location: 64605-65522 bp Feature: domain Description: GstA Location: 64620-65271 bp Feature: domain Description: GstA Location: 64620-65271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DAP2 (COG1506), RVT-GII, AraC_binding_2 (pfam14525), AraC (COG2207), GstA (COG0625)

Seq: PSRS01000433.1 (1841 bp)
Overview 1 RT 1: 2-1652 bp Neighborhood of RT #1 [2, 1756] RVT-GII GIIM Feature: gene Location: 2-190 bp Feature: gene Location: 425-1756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716-1379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716-1379 bp Feature: domain Description: GIIM Note: maturase Location: 1448-1652 bp Feature: domain Description: GIIM Note: maturase Location: 1448-1652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PSRS01000553.1 (567 bp)
Overview 1 RT 1: 2-323 bp Neighborhood of RT #1 [2, 565] RVT-GII Feature: gene Location: 2-565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII