myRT

myRT report for GCA_004214365.1_ASM421436v1

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Seq: RHHK01000007.1 (183895 bp)
Overview 1 RT 1: 17813-24406 bp 2 RT 2: 42014-44481 bp Neighborhood of RT #1 [17813, 24414] HATPase_c_3 HSDR_N_2 RVT-UG15 YpwA RhtB Neighborhood of RT #2 [42014, 44481] RVT-GII GIIM Feature: gene Location: 17813-18088 bp Feature: gene Location: 18166-20169 bp Feature: domain Description: HATPase_c_3 Location: 18232-18547 bp Feature: domain Description: HATPase_c_3 Location: 1 8232-1 8547 bp Feature: domain Description: HSDR_N_2 Location: 19681-19864 bp Feature: domain Description: HSDR_N_2 Location: 1 9681 -1 9864 bp Feature: gene Location: 20302-21900 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 20713-21115 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 2071 3-21 1 1 5 bp Feature: gene Location: 22068-23540 bp Feature: domain Description: YpwA Location: 22074-23538 bp Feature: domain Description: YpwA Location: 22074-23538 bp Feature: gene Location: 23779-24414 bp Feature: domain Description: RhtB Location: 23782-24406 bp Feature: domain Description: RhtB Location: 23782-24406 bp Feature: gene Location: 42014-42169 bp Feature: gene Location: 42177-42326 bp Feature: gene Location: 42477-43691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42621-43242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42621 -43242 bp Feature: domain Description: GIIM Note: maturase Location: 43293-43506 bp Feature: domain Description: GIIM Note: maturase Location: 43293-43506 bp Feature: gene Location: 43792-44061 bp Feature: gene Location: 44344-44481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HATPase_c_3 (pfam13589), HSDR_N_2 (pfam13588), RVT-UG15, YpwA (COG2317), RhtB (COG1280), RVT-GII, GIIM (pfam08388)

Seq: RHHK01000013.1 (152583 bp)
Overview 1 RT 1: 59312-63731 bp Neighborhood of RT #1 [59312, 63736] RVT-GII GIIM DUF469 PhoX Feature: gene Location: 59312-59467 bp Feature: gene Location: 59475-59621 bp Feature: gene Location: 59772-60986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59916-60537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59916-60537 bp Feature: domain Description: GIIM Note: maturase Location: 60588-60801 bp Feature: domain Description: GIIM Note: maturase Location: 60588-60801 bp Feature: gene Location: 61069-61407 bp Feature: domain Description: DUF469 Location: 61102-61402 bp Feature: domain Description: DUF469 Location: 61102 -61402 bp Feature: gene Location: 61694-63736 bp Feature: domain Description: PhoX Location: 61727-63731 bp Feature: domain Description: PhoX Location: 6172 7-63731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF469 (pfam04320), PhoX (COG3211)

Seq: RHHK01000015.1 (130014 bp)
Overview 1 RT 1: 67425-70840 bp Neighborhood of RT #1 [67425, 70854] RVT-GII RVT-GII GIIM DUF2927 SapF Feature: gene Location: 67425-67580 bp Feature: gene Location: 67596-67733 bp Feature: gene Location: 67815-68093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68028-68091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68028-68091 bp Feature: gene Location: 68199-69098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68220-68649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68220-68649 bp Feature: domain Description: GIIM Note: maturase Location: 68700-68919 bp Feature: domain Description: GIIM Note: maturase Location: 68700-68919 bp Feature: gene Location: 69217-69999 bp Feature: domain Description: DUF2927 Location: 69316-69907 bp Feature: domain Description: DUF2927 Location: 693 16-69907 bp Feature: gene Location: 70069-70854 bp Feature: domain Description: SapF Location: 70072-70840 bp Feature: domain Description: SapF Location: 70072-70840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF2927 (pfam11150), SapF (COG4167)